Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00769 ATGGGAGAGGAAGTGAAGCTATTAGATTTCTGGCCCAGCATGTTCGGGATGAGAGTTAAAATAGCTCTGGCAGAGAAGGGTGTGGCGTATGAGTATGTGGAACAAGACCTGAGAAATAAGAGTCCTTTGCTTCTTCAAATGAACCCAATTCACAAGCAGATCCCAGTTCTTATCCATAATGGAAAACCCATTTGTAAATCTTCCATTATTGTTGAGTACATTGATGAATTTTGGAAGGATAAAGCTTCTCTGTTGCCGTCCGATCCTTATGAAAGAGCTCAGGCCAGATTTTGGGTGGATTTCATCGATAAGAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGACATAAAACAGAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTACAAGAAGAGCTTGGAGATAAAGACTTATTTTGGTGGCAAAACATTTGGGTTTATAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAATTGCTTGGAAAATTGGACTTAGAAGTTGA 540 39.26 MGEEVKLLDFWPSMFGMRVKIALAEKGVAYEYVEQDLRNKSPLLLQMNPIHKQIPVLIHNGKPICKSSIIVEYIDEFWKDKASLLPSDPYERAQARFWVDFIDKKIYPIGSKLWNRHKTEEEKEAAAKELLECFKQLQEELGDKDLFWWQNIWVYRYCSHSILQHVSCIQIAWKIGLRS* 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5302051 5304671 - CsaV3_4G007690.1 Csa04g00769 526379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00769 179 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 179 IPR010987 -
Csa04g00769 179 Gene3D Glutaredoxin 1 87 - -
Csa04g00769 179 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Csa04g00769 179 Gene3D - 88 170 - -
Csa04g00769 179 CDD GST_N_Tau 5 78 - -
Csa04g00769 179 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 148 IPR045073 -
Csa04g00769 179 SFLD Main.3: Omega- and Tau-like 2 148 IPR045073 -
Csa04g00769 179 SFLD Glutathione Transferase (cytosolic) 2 148 IPR040079 -
Csa04g00769 179 SUPERFAMILY GST C-terminal domain-like 85 159 IPR036282 -
Csa04g00769 179 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Csa04g00769 179 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Csa04g00769 179 Coils Coil 120 140 - -
Csa04g00769 179 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00769 Csa-Chr4:5302051 Csa04g00772 Csa-Chr4:5329810 3.22E-69 dispersed
Csa04g00769 Csa-Chr4:5302051 Csa04g00770 Csa-Chr4:5309846 4.05E-69 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00769 K00799 - csv:101218562 220.32