Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g00770 | ATGGCGGACCAAGTCAAGTTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGAGTCAGAGTAGCCCTTGCTCTCAAGTGCGTGCCCTACGAATATGTGGATGAAGATCTCACAAACAAGAGCCCTTTGCTTCTTCAAATGAACCCAATTCACAAGAAAATCCCTGTTCTTATTCATAATGGAAAGCCCATTTGTGAATCTTCCATAATCGTCCAGTATATTGATGAATTTTGGAAGGATAAAGCTCCTCTGTTTCCTACTCATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTTGATTTCATCGATAAGAAGCTTTTTGATTGTGGGAGGAAAATTTGGGCTAGCAAAGGAGAGGAGCAAGAAGAAGGTAAAACGGAGGTAATAGGAATATTGAAGCAGCTTGAAGAAGTAATCGGGGAGAAGGCTTACTTTGGAGGTGAATGTTTGGGATTTGTAGACATAGTTTTGATTGGATATTACACTTGGTTTTATGCCTATGAGACCATTGGAAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAATGAGTTGGGCAAAGAGATGCTTACAAAATGAGAGTGTTTCTGAGTCCCTACCTGACCCCAAAAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGGCTTTGA | 657 | 41.25 | MADQVKLLDFWPSMFGMRVRVALALKCVPYEYVDEDLTNKSPLLLQMNPIHKKIPVLIHNGKPICESSIIVQYIDEFWKDKAPLFPTHPYDRAQARFWVDFIDKKLFDCGRKIWASKGEEQEEGKTEVIGILKQLEEVIGEKAYFGGECLGFVDIVLIGYYTWFYAYETIGNFSIESECPKIMSWAKRCLQNESVSESLPDPKKVCDFVLQMKKKYGL* | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5309846 | 5311663 | - | CsaV3_4G007700.1 | Csa04g00770 | 526380 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g00770 | 218 | SFLD | Main.3: Omega- and Tau-like | 2 | 216 | IPR045073 | - | |
Csa04g00770 | 218 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Csa04g00770 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 210 | IPR045073 | - | |
Csa04g00770 | 218 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Csa04g00770 | 218 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Csa04g00770 | 218 | SUPERFAMILY | Thioredoxin-like | 4 | 106 | IPR036249 | - | |
Csa04g00770 | 218 | SUPERFAMILY | GST C-terminal domain-like | 76 | 216 | IPR036282 | - | |
Csa04g00770 | 218 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 216 | IPR010987 | - | |
Csa04g00770 | 218 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364|GO:0006749 | |
Csa04g00770 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 4 | 210 | - | - | |
Csa04g00770 | 218 | Pfam | Glutathione S-transferase, C-terminal domain | 115 | 191 | IPR004046 | - | |
Csa04g00770 | 218 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Csa04g00770 | 218 | SFLD | Main (cytGST) | 2 | 216 | - | - | |
Csa04g00770 | 218 | Gene3D | - | 88 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g00770 | Csa-Chr4:5309846 | Csa05g01429 | Csa-Chr5:15390580 | 7.38E-81 | dispersed | |
Csa04g00770 | Csa-Chr4:5309846 | Csa04g00772 | Csa-Chr4:5329810 | 4.38E-114 | proximal | |
Csa04g00769 | Csa-Chr4:5302051 | Csa04g00770 | Csa-Chr4:5309846 | 4.05E-69 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g00770 | K00799 | - | csv:101217848 | 458.373 |