Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00954 ATGGCATCCATTTCAAAACGGCTACTCCTCTTCGTGGCAGCGCTACTTGCCACCGCAAAAATGGCTACCTCCGTTACCCGATGTCCGGACTGCGGCGGGGTTGCCGTACCCTATCCTCTAAGTACAAGCCCCACTTGTGGTGACCAATTGTACAAGATCCGGTGCGACGCAGGCTCACTGAAATTCGACACGCTAAACAACACGTACCCGATCCTCTCAATCAACCCGTTGACCCAACGCCTGGTGATCCGCCCCTCAAATTTCATCCCCAACACGTGCGTGACAGTGGATATCGCCCACGGAGGAATTAAACTGAACAGTAATTTACCGTTCAACGTGACGAGCGGGAACACGATCCTCTACTTCAACTGTACGGATTTGCTGTTGCGCTCGCCGTTGAACTGCTCGTCGACGAGTCTGTGCCATTCGTACATCAAGGGATCGGGAGGAGAAGCGACGGCGTGCGAGATGGCGCCGTTGTGCTGCACGTTTCGGACGGGTGGATCTTCGAATTCGTACATGATTAGGGTGAGGGAATCAGGGTGTAGAGCGTACACGAGCTTTGTGAATTTGGACCCGAGTTTGGGAGTGGGTCAATGGCCGGAACCGGGTTTAGAGTTGCAGTGGCTTTTGCCGAGGGAACCGGTTTGTAATACGGAGGCTGATTGTGACGGGAACGCGGTTTGTGGTGTTGATCCTAACGGGACGGGGTTGAGGCGTTGTGTTTGTAATTCAGGGTTTGTGTGGGACCCTGTTGCTGGAATCTGTTCTCAAAGTGAGCGTTTTCTATTGGATTGA 798 53.26 MASISKRLLLFVAALLATAKMATSVTRCPDCGGVAVPYPLSTSPTCGDQLYKIRCDAGSLKFDTLNNTYPILSINPLTQRLVIRPSNFIPNTCVTVDIAHGGIKLNSNLPFNVTSGNTILYFNCTDLLLRSPLNCSSTSLCHSYIKGSGGEATACEMAPLCCTFRTGGSSNSYMIRVRESGCRAYTSFVNLDPSLGVGQWPEPGLELQWLLPREPVCNTEADCDGNAVCGVDPNGTGLRRCVCNSGFVWDPVAGICSQSERFLLD* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7240398 7241195 - CsaV3_4G009540.1 Csa04g00954 526564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00954 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 5 258 - -
Csa04g00954 265 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 20 5 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00476 Csa-Chr2:3391050 Csa04g00954 Csa-Chr4:7240398 5.29E-45 dispersed
Csa04g00954 Csa-Chr4:7240398 Csa06g00136 Csa-Chr6:890174 2.41E-171 dispersed
Csa04g00953 Csa-Chr4:7234540 Csa04g00954 Csa-Chr4:7240398 1.37E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00954 - - csv:101220186 510.76