Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00955 ATGGAAAATTTTGCGCTCCAATCTGTCTCCACTACCACTTCTTTTTCCCTCCATTCTCCCACTTCTCGACTTTCTCTCCTCCATCGCTCTAAACCCATTTCCCAGTCCCTCTCCTTTCCCTCTTCCCTTCATTTTTCTCGCTCTACTTCGCTACTTCAATCAACCCCACCAATCCCCCAATCCCCTTTTCTCAGTTCTCGATTGTCCCTCTTCAATCCCCTCTTCAATCCCAAATTGCGTCAACCTTTTCCAATGCGAACCAGTGCCTCTCAATCGCCGGATAATCAACCAGTGCCACCGTCCCCACCTCCCCGACAAGGTGCTAAGCCAATCCCTTTCCTGATTTCTATTGCTATTGGCCTCATTGTTCGGTTTGCTGTCCCGAAACCGGTGGAGGTTTCTGCTGAAGCGTGGCAGTTACTCTCAATTTTCCTATCGACTATTGCTGGACTTGTTCTGAGTCCCTTGCCGGTTGGTGCTTGGGCGTTTCTTGGCTTGACTGTTACTGTGGTTACTAAGACTTTGACGTTTGCTGCTGCTTTTAATGCTTTCACCAGTGAGGTGATTTGGTTGATTGTCATTTCCTTCTTTTTCGCTCGTGGGTTTGTGAAAACTGGGTTGGGTGATCGAATTGCGACGTATTTTGTTAAATGGATGGGGAAGAGTACACTTGGTTTGTCTTATGGTTTGACGATTAGTGAAGCTTTGATTGCTCCTGCTATGCCCAGCACTACGGCCAGGGCTGGGGGTGTGTTTTTGCCCATTATTAAATCTTTGTCACTTGCTGCTGATAGTAAACCGAACCACCCATCGTCTAGAAAAATCGGTGCTTACCTTATTCAATCTCAGTTTCAGTGTGCTGGTAACTCTAGTGCCCTCTTCCTAACTGCTGCTGCTCAAAACTTGTTGTGTCTTAAATTGGCTGAGGAACTTGGTGTTCAAATATCTAGCCCTTGGCTTACTTGGGCCAAGTTTGCTTGTGCGCCAGCAATCATCGGTATCTTAGTAACTCCAGCAATTCTATACAAGCTGTTTCCTCCAGAAACCAAGGACACACCGGAGGCCCCAGCCATGGCTGCAAGAAAATTGGAGGCTATGGGTCCTGTCACTAAAAATGAATGGATCATGGTCGGTACAATGCTTATTGCAGTCTCGTTATGGATTGCTGGAGAGGCCCTTAAAATACCTAGTGTTGTAGCTGCGATGATTGGATTATCAATACTCCTTACACTGGGAGTCCTAAACTGGGATGACTGCTTATCCGAAAAGTCAGCCTGGGATACATTAGCTTGGTTCGCCGTCCTGGTAGGCATGGCTGGCCAATTGACAAGTCTTGGTCTCGTGGGCTGGATGTCAAACTGTGTGGCCGGTTTGCTGAAGTCTCTTTCTCTCAGCTGGCCTGCGGCATTTGCTATTCTTCAGGCATCTTACTTCTTCGTTCACTACCTCTTTGCTAGCCAAACTGGTCACGTTGGTGCTTTGTACTCAGCATTCCTTGCAATGCACTTGGCTGCCAAGGTACCAGGTGTGTTGGCAGCTTTGGCCTTAGCTTACAACACAAATCTCTTTGGCGCTCTGACTCATTACAGCAGCGGCCAAGCAGCTGTATACTATGGAGCGGGTTACGTCGAACTACCAGACGTATTCAAAATCGGTTTTGTGATGGCCCTCATAAACGGTTTTATCTGGACTGTGGTTGGTTGTATTTGGTGGAAGATTCTAGGTCTATATTGA 1734 47.23 MENFALQSVSTTTSFSLHSPTSRLSLLHRSKPISQSLSFPSSLHFSRSTSLLQSTPPIPQSPFLSSRLSLFNPLFNPKLRQPFPMRTSASQSPDNQPVPPSPPPRQGAKPIPFLISIAIGLIVRFAVPKPVEVSAEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVTVVTKTLTFAAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNHPSSRKIGAYLIQSQFQCAGNSSALFLTAAAQNLLCLKLAEELGVQISSPWLTWAKFACAPAIIGILVTPAILYKLFPPETKDTPEAPAMAARKLEAMGPVTKNEWIMVGTMLIAVSLWIAGEALKIPSVVAAMIGLSILLTLGVLNWDDCLSEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVAGLLKSLSLSWPAAFAILQASYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKIGFVMALINGFIWTVVGCIWWKILGLY* 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7249812 7253991 - CsaV3_4G009550.1 Csa04g00955 526565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00955 577 Pfam Sodium:sulfate symporter transmembrane region 113 576 IPR001898 GO:0016020|GO:0022857|GO:0055085
Csa04g00955 577 PANTHER DICARBOXYLIC ACID TRANSPORTER2 43 577 - -
Csa04g00955 577 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 129 571 IPR001898 GO:0016020|GO:0022857|GO:0055085
Csa04g00955 577 MobiDBLite consensus disorder prediction 82 105 - -
Csa04g00955 577 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 43 577 IPR030676 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00955 Csa-Chr4:7249812 Csa04g01416 Csa-Chr4:14178993 7.17E-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00955 - K03319 csv:101213018 1097.42