Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g00968 | ATGGCTGGTCAATCAGATCCTCACCTGAACCTATTTTCTGCAGAAGAGGTGGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTATTCCCAATATGAGAATGGATTCTCTGCATTTGATCTGTGGGGATTATGGTCCATTCTATCCCCAAATAGCAACTGAAGTTCCATTGTGGCTAGCGATTGCTCTGAAAAAAAGAGGGAAATGTGCAATTAGGACTCCAGAGTGGATGTCAGTGGAAAAGTTGACACAAATTTTGGAGGCAGAACGAGATTCTCAAGGATCTTTCCAGATATTACCCTTTCATTACGTGGAAATATCAAAACTTCTTTTTGACCATGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGATATCAGAGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATCGATACGCGCACATCTGCAGTGAAGATTAAAGATCTATCTGCTATGGAAGTGAATATAGTTCGACCTTTCGTCGTTAGAGCACTGCAAGCAATTTACAAGCATGGAAATCCAGAATTGGTCCCAGATCAAGATAGGATGACCAATATGCAGACACAAGGACAAGATCATGGACAAAGACGGCGGCCTCTTCGAAGACGGTAG | 639 | 42.1 | MAGQSDPHLNLFSAEEVEFVAEDEMVEIIPNMRMDSLHLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSVEKLTQILEAERDSQGSFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVVRALQAIYKHGNPELVPDQDRMTNMQTQGQDHGQRRRPLRRR* | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7428426 | 7439500 | - | CsaV3_4G009680.1 | Csa04g00968 | 526578 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g00968 | 212 | CDD | GINS_A_psf2 | 66 | 182 | - | - | |
Csa04g00968 | 212 | PANTHER | DNA REPLICATION COMPLEX GINS PROTEIN PSF2 | 1 | 198 | IPR007257 | GO:0005634|GO:0006260 | |
Csa04g00968 | 212 | Pfam | GINS complex protein | 53 | 162 | IPR021151 | - | |
Csa04g00968 | 212 | Gene3D | - | 12 | 77 | - | - | |
Csa04g00968 | 212 | Gene3D | - | 78 | 192 | - | - | |
Csa04g00968 | 212 | SUPERFAMILY | PriA/YqbF domain | 12 | 71 | - | - | |
Csa04g00968 | 212 | MobiDBLite | consensus disorder prediction | 183 | 212 | - | - | |
Csa04g00968 | 212 | SUPERFAMILY | GINS helical bundle-like | 74 | 182 | IPR036224 | - | |
Csa04g00968 | 212 | PIRSF | GINS_PSF2 | 2 | 212 | IPR007257 | GO:0005634|GO:0006260 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g00968 | K10733 | - | csv:101212053 | 411.379 |