Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01293 ATGTTCATAACCAAAGAGCTCAAACCGCTCTCCAATGGCCCTCTCTTTATCCCTACAACAACTCATTCGCTTCCCTCCCCATCCTCTCACCTCGCCTCTCTCTCCCGCTTCTTCCCATCTCCATGCCTTTCCTCTTTCGCTCCGTCCCCAGACTATGCCGTCAAGTTATCTTCCAGAACAAAGTGTTTCTCCATGTCCACTGAGGAGGACAAGTGGAGTGAATCTGATGCGTTTGTCTCCGATGTCGACGAAGGGGGTGATCTTGAGGATGACATTGATATTAGTGTTCGGGAAGACAGCCCTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCTTCACCCAGTGATTATCTCTCGCTTGCGATTCCTGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGCTGATGGAACCGTATCCACCAGGAAGGTTAACAGACGGCAGCTGTTGAAGTCAAGTGGGCTTCGTCCTCGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTACGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCCATGCAGGATTGTGTCCTCATATTCGATCATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGGGTGCCAGCAATGCCATTTGAACTCGAGTCTAGCCGCTAG 720 48.06 MFITKELKPLSNGPLFIPTTTHSLPSPSSHLASLSRFFPSPCLSSFAPSPDYAVKLSSRTKCFSMSTEEDKWSESDAFVSDVDEGGDLEDDIDISVREDSPVATAASAQRISSSPSDYLSLAIPEQVYEVLEVKADGTVSTRKVNRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDHNRPGGQAFIESLLPRLNPKNMNGVPAMPFELESSR* 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13105092 13111317 + CsaV3_4G022020.1 Csa04g01293 526903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01293 239 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 42 236 IPR039204 -
Csa04g01293 239 Gene3D - 120 204 - -
Csa04g01293 239 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 42 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01423 Csa-Chr1:9745712 Csa04g01293 Csa-Chr4:13105092 1.54E-149 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01293 K16075 - csv:105435225 441.039