Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01351 ATGGCGGCTTCTTCTAAAGTTATTGTTTCTTTGGTACTGTGTTTGATGATGGCTGTGTCTGTGAGATCTCAGCTTAGCTCCACCTTCTATGACACTACATGTCCTAACGTATCAAGCATTGTGCATGGTGTTATGCAGCAAGCTCTTCAAAGTGACGATAGAGCCGGTGCCAAAATCATCCGTCTCCATTTTCACGATTGTTTCGTCGACGGTTGTGATGGGTCGGTGCTACTCGAGGACCAAGATGGTATAACGAGTGAGTTGGGTGCACCTGGAAACGGAGGCATCACGGGTTTCAATATTGTTAATGACATCAAAACCGCAGTTGAGAATGTTTGTCCAGGAGTCGTTTCATGTGCTGACATTCTAGCCCTTGGTTCTAGAGACGCAGTCACCTTGGCATCAGGACAGGGTTGGACGGTTCAATTGGGAAGAAGAGACAGTAGAACAGCAAATTTGCAAGGAGCCAGGGATAGGCTCCCAAGTCCTTTTGAGAGTCTCTCCAACATCCAAGGTATATTCAGAGATGTTGGTCTTAACGATAATACCGATCTCGTTGCTCTATCAGGTGCACACACATTCGGGCGTTCAAGATGCATGTTTTTCAGCGGACGCCTAAACAATAATCCAAACGCAGATGACTCACCCATAGACTCGACATACGCGAGTCAGTTGAACCAAACTTGTCAATCAGGGTCAGGCACATTCGTGGATTTGGACCCGACGACGCCAAACACATTCGATAGAAACTACTACACAAACCTTCAGAACAACCAAGGGCTTTTGAGAAGTGACCAAGTTCTGTTCTCCACTCCAGGAGCTTCAACTATCGCTACTGTCAACAGCTTAGCCAGCAGCGAGAGCGCATTTGCTGACGCCTTCGCTCAATCAATGATCAGGATGGGAAATCTCGACCCTAAGACTGGAACCACCGGAGAAATCAGAACCAATTGTAGAAGACTCAATTAA 969 46.75 MAASSKVIVSLVLCLMMAVSVRSQLSSTFYDTTCPNVSSIVHGVMQQALQSDDRAGAKIIRLHFHDCFVDGCDGSVLLEDQDGITSELGAPGNGGITGFNIVNDIKTAVENVCPGVVSCADILALGSRDAVTLASGQGWTVQLGRRDSRTANLQGARDRLPSPFESLSNIQGIFRDVGLNDNTDLVALSGAHTFGRSRCMFFSGRLNNNPNADDSPIDSTYASQLNQTCQSGSGTFVDLDPTTPNTFDRNYYTNLQNNQGLLRSDQVLFSTPGASTIATVNSLASSESAFADAFAQSMIRMGNLDPKTGTTGEIRTNCRRLN* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13727744 13729872 - CsaV3_4G023590.1 Csa04g01351 526961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01351 322 PANTHER PEROXIDASE 72-RELATED 13 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 Gene3D Peroxidase, domain 2 161 301 - -
Csa04g01351 322 PANTHER PEROXIDASE 58 13 322 - -
Csa04g01351 322 Gene3D - 29 322 - -
Csa04g01351 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Csa04g01351 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Csa04g01351 322 SUPERFAMILY Heme-dependent peroxidases 24 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01351 322 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01351 Csa-Chr4:13727744 Csa05g00500 Csa-Chr5:3226466 2.57E-130 dispersed
Csa04g01351 Csa-Chr4:13727744 Csa04g01353 Csa-Chr4:13735214 1.69E-145 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01351 K00430 - csv:101212957 635.18