Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01353 | ATGGCTTCCTTGTTCAGAGTTGCTTTCTTTTTGTTTCTGGGGTTGATGGTTAGAGCTTCTCAAGCTCAGCTCTGCCCCACGTTTTACGACGAATCATGCCCCGACGTATCCAACATTGTGCGCCGTGTGGTACAACAAGCTTTGGTCTCTGACGAACGTGCTGGTGCCAGACTCATTCGACTTCATTTCCACGACTGCTTCGTAAATGGGTGTGATGGGTCGGTTTTACTAGAGGACCAACCTGGTGTGGTGAGTGAGCTTGCCGCTCCTGGAAATGCCAATATTACAGGGTTTAACATTGTTAATAACATCAAAGCTGCAGTCGAAAAGGCTTGTCCTGGTGTTGTTTCATGTGCTGACATCTTAGCTATAGCTTCCGTGGAATCAGTTAATTTGGCAGGAGGACCGTGTTGGGAGGTACAACTAGGAAGAAGAGACAGTAGAAGGGCAAATTTACAAGGCGCAATAGATGGCCTTCCAAGTCCTTTCGAAAATGTTACACAACTTAAACGCAAGTTCGATAGAGTAGATCTTGATTCTACTGATCTTGTTGCCTTATCTGGTGCACACACATTCGGGAAATCGAGATGTCAATTTTTCGACCGACGTTTAAACGTTTCAAATCCAGATAGCACGCTGAATCCCAGGTATGCACAACAGCTCCGTCAAGCTTGCAGTAGCGGCCGAGACACGTTTGTGAATCTGGACCCCACGACTCCCAACAAGTTCGACAAGAACTACTACACAAACCTTCAGTCCAACACCGGCCTTCTCACCAGTGACCAAGTCCTTCATTCCACTCCCGGCGAAGACACCGTCAAAATCGTCAACCTCTTCGCTGCCAGCCAGAACCAGTTCTTCGAAAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCCAACCGTTGACTGGTAACCAAGGAGAAATTAGATCCAATTGCCGAAGGCTGAACTAA | 957 | 47.34 | MASLFRVAFFLFLGLMVRASQAQLCPTFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVESVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSGRDTFVNLDPTTPNKFDKNYYTNLQSNTGLLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN* | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13735214 | 13738155 | - | CsaV3_4G023610.1 | Csa04g01353 | 526963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01353 | 318 | Gene3D | Peroxidase, domain 2 | 160 | 297 | - | - | |
Csa04g01353 | 318 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601 | |
Csa04g01353 | 318 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 318 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PANTHER | PEROXIDASE 58 | 11 | 318 | - | - | |
Csa04g01353 | 318 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Haem peroxidase superfamily signature | 134 | 146 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Haem peroxidase superfamily signature | 236 | 251 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | Pfam | Peroxidase | 40 | 282 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 96 | 109 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 115 | 125 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 134 | 149 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 234 | 249 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 250 | 267 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | PRINTS | Plant peroxidase signature | 292 | 305 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | Gene3D | - | 28 | 318 | - | - | |
Csa04g01353 | 318 | PANTHER | PEROXIDASE 72-RELATED | 11 | 318 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 318 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01353 | 318 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - | |
Csa04g01353 | 318 | CDD | secretory_peroxidase | 23 | 316 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g01353 | Csa-Chr4:13735214 | Csa04g01358 | Csa-Chr4:13768635 | 1.25E-145 | dispersed | |
Csa04g01351 | Csa-Chr4:13727744 | Csa04g01353 | Csa-Chr4:13735214 | 1.69E-145 | proximal | |
Csa04g01353 | Csa-Chr4:13735214 | Csa04g01354 | Csa-Chr4:13743414 | 6.35E-135 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01353 | K00430 | - | csv:101212717 | 640.188 |