Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01353 ATGGCTTCCTTGTTCAGAGTTGCTTTCTTTTTGTTTCTGGGGTTGATGGTTAGAGCTTCTCAAGCTCAGCTCTGCCCCACGTTTTACGACGAATCATGCCCCGACGTATCCAACATTGTGCGCCGTGTGGTACAACAAGCTTTGGTCTCTGACGAACGTGCTGGTGCCAGACTCATTCGACTTCATTTCCACGACTGCTTCGTAAATGGGTGTGATGGGTCGGTTTTACTAGAGGACCAACCTGGTGTGGTGAGTGAGCTTGCCGCTCCTGGAAATGCCAATATTACAGGGTTTAACATTGTTAATAACATCAAAGCTGCAGTCGAAAAGGCTTGTCCTGGTGTTGTTTCATGTGCTGACATCTTAGCTATAGCTTCCGTGGAATCAGTTAATTTGGCAGGAGGACCGTGTTGGGAGGTACAACTAGGAAGAAGAGACAGTAGAAGGGCAAATTTACAAGGCGCAATAGATGGCCTTCCAAGTCCTTTCGAAAATGTTACACAACTTAAACGCAAGTTCGATAGAGTAGATCTTGATTCTACTGATCTTGTTGCCTTATCTGGTGCACACACATTCGGGAAATCGAGATGTCAATTTTTCGACCGACGTTTAAACGTTTCAAATCCAGATAGCACGCTGAATCCCAGGTATGCACAACAGCTCCGTCAAGCTTGCAGTAGCGGCCGAGACACGTTTGTGAATCTGGACCCCACGACTCCCAACAAGTTCGACAAGAACTACTACACAAACCTTCAGTCCAACACCGGCCTTCTCACCAGTGACCAAGTCCTTCATTCCACTCCCGGCGAAGACACCGTCAAAATCGTCAACCTCTTCGCTGCCAGCCAGAACCAGTTCTTCGAAAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCCAACCGTTGACTGGTAACCAAGGAGAAATTAGATCCAATTGCCGAAGGCTGAACTAA 957 47.34 MASLFRVAFFLFLGLMVRASQAQLCPTFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVESVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSGRDTFVNLDPTTPNKFDKNYYTNLQSNTGLLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN* 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13735214 13738155 - CsaV3_4G023610.1 Csa04g01353 526963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01353 318 Gene3D Peroxidase, domain 2 160 297 - -
Csa04g01353 318 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Csa04g01353 318 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PANTHER PEROXIDASE 58 11 318 - -
Csa04g01353 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 Pfam Peroxidase 40 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 Gene3D - 28 318 - -
Csa04g01353 318 PANTHER PEROXIDASE 72-RELATED 11 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01353 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Csa04g01353 318 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01353 Csa-Chr4:13735214 Csa04g01358 Csa-Chr4:13768635 1.25E-145 dispersed
Csa04g01351 Csa-Chr4:13727744 Csa04g01353 Csa-Chr4:13735214 1.69E-145 proximal
Csa04g01353 Csa-Chr4:13735214 Csa04g01354 Csa-Chr4:13743414 6.35E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01353 K00430 - csv:101212717 640.188