Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01354 | ATGTTGAATATCAGCCGCCGGCATGCCCCACTCTGCTTTACCGATCTCTATAAAAACAGCTTCCATTGCTTAACATTTTGCTCACTACAAAATTCAAAAATGGCCTCCTCCTCCGCCAACGCTGTCATCTCCTCCTTTTTCTTTCTATCTCTTCTCATCGGCGGCTCTTTCGCTCAACTCTCCGAAACCTTTTACGATCAAACCTGCCCTCGTTTGGCCAACGTTGTGCGCGCCTCCGTCAAGAAAGCCATCGAAAGCGACATCCGTGCGGGTGCTAAACTTATTCGTCTCCATTTCCACGATTGCTTCGTCAATGGATGCGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGTCAGTGAGCTTAACTCACCTGGAAATCAAGGAATCCAAGGGCTTGAAATTGTCGACGCCATTAAAGCCGACGTCGAAAGAGAATGCCCTGGCATCGTCTCCTGTGCTGACATCCTAGCTCAGGCTTCTAAAGACTCTGTCGATGTGCAAGGAGGGCCTAGCTGGAGAGTGTTATACGGAAGACGAGACAGCAGAATAGCAAACAAAACAGGGGCCGACAGTAACTTGGCTAGTCCCTTCGAAACTCTAGACCAACTTAAAGCTAAATTTAGGAATGTTGGGCTCAATACCATGGATCTCGTCTCTTTATCTGGGGCGCATACATTTGGACGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAATACAGGAAGGCCAGACCAATCATTGAACCCAGACTACAGGAGCTTTCTTGAAGGGGTTTGTTCAGCAGGAGCAGACACAAGAGCGAATTTCGATCCAGTAACACCGGATGTGTTTGACAAAAATTACTACACAAATCTTCAAGTGGGGAAGGGGCTTTTGCAGAGCGATCAAGAGCTGTTCTCAACACCTGGAGCTGACACCATCGCCATTGTTAACAGCTTTGCAGAAAGAGAAGGAACATTCTTCAAGGAGTTCAGACAGTCGATGATCAATATGGGAAATATAAAGCCATTGACTGGTGGACAAGGGGAAATTAGAAGAAACTGCAGGAGGGTTAATTCAAACTCTGGTTTGTTGGGTGGAGAAGGAGAAGGATCAGAAGGCCACGATGTTATCCTCCGCCAAATCCCACTCTGTTTTGGTCTCTATAAAAGCAGCATCCACTCCTCAACCTTTTGCTCACTTCCTAATTCAACCATGGCCTCTGCCGTTGCCTCCTTTTTCTTTCTTGCCCTTCTCTTCCGCTCCTCTTTTGCTCAACTCTCCGAAACCTATTACGATCAAACCTGCCCTCGTCTCCCCAACATTGTCCGTGCCTCCGTCAAGAAAGCCATCCAATCCGACATACGTGCCGGTGCTAAACTCATTCGCCTCCATTTCCATGATTGCTTCGTCAATGGATGCGATGGCTCTGTTTTGCTAGAGGATGCTCCTGGCATAGTCAGTGAGCTTAACTCACCTGGAAATCAAGGAATCCAAGGACTTGAAATTGTTGACGCCATTAAAACGGATGTCGAAAAAGAATGCCCCGGCATCGTCTCCTGTGCTGACATCCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGCTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAATCGCTAACAAAACAGGGGCGGATAGTGGGTTAGCCAGTCCCTTCGAAACTCTAGATGAACTCAAAGCCAAATTTGCTGCTGTTGGGCTGGATAGCACTGATCTCGTCGCTTTATCTGGGGCGCATACATTTGGACGATCGAGATGCGTATTCTTCAGCCACCGATTTGCGAATTTCAACGGAACTGGAAGCCCCGACCCATCACTGGATTCGAACTACAGGCAATTCCTTGAAGGGGTTTGTTCAGCAGGAGCAAACACAAGAGCCAATTTCGACCCGGTAACACCAGATGTGTTCGACAAAAATTACTACACGAATCTTCAAGTGGGGAAGGGACTTTTACAGAGCGATCAAGAGCTGTTCTCTACTCCTGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCTGCCAGAGAAGGAACATTCTTCAAGGAGTTCCGGAAGTCAATGATCAATATGGGAAATATTAAACCTTTGACTGGAAAGCGTGGGGAAATTAGAAGAAACTGTAGAAGGGTTAATTCCAACTCTGGATTGTTCGGTGAAGAAGAAGAAGAAGAAGGCCATGATGTCATGTAA | 2229 | 47.38 | MLNISRRHAPLCFTDLYKNSFHCLTFCSLQNSKMASSSANAVISSFFFLSLLIGGSFAQLSETFYDQTCPRLANVVRASVKKAIESDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSNLASPFETLDQLKAKFRNVGLNTMDLVSLSGAHTFGRSRCRFFSHRFANFNNTGRPDQSLNPDYRSFLEGVCSAGADTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAEREGTFFKEFRQSMINMGNIKPLTGGQGEIRRNCRRVNSNSGLLGGEGEGSEGHDVILRQIPLCFGLYKSSIHSSTFCSLPNSTMASAVASFFFLALLFRSSFAQLSETYYDQTCPRLPNIVRASVKKAIQSDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKTDVEKECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDELKAKFAAVGLDSTDLVALSGAHTFGRSRCVFFSHRFANFNGTGSPDPSLDSNYRQFLEGVCSAGANTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRKSMINMGNIKPLTGKRGEIRRNCRRVNSNSGLFGEEEEEEGHDVM* | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13743414 | 13747992 | - | CsaV3_4G023620.1 | Csa04g01354 | 526964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01354 | 742 | Gene3D | Peroxidase, domain 2 | 196 | 337 | - | - | |
Csa04g01354 | 742 | Gene3D | Peroxidase, domain 2 | 562 | 703 | - | - | |
Csa04g01354 | 742 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 584 | 594 | IPR019793 | - | |
Csa04g01354 | 742 | ProSiteProfiles | Plant heme peroxidase family profile. | 425 | 724 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | ProSiteProfiles | Plant heme peroxidase family profile. | 59 | 358 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Haem peroxidase superfamily signature | 518 | 535 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Haem peroxidase superfamily signature | 457 | 471 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Haem peroxidase superfamily signature | 642 | 657 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Haem peroxidase superfamily signature | 536 | 548 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Haem peroxidase superfamily signature | 584 | 599 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | SUPERFAMILY | Heme-dependent peroxidases | 425 | 724 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PANTHER | PEROXIDASE 72-RELATED | 48 | 358 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | Gene3D | - | 430 | 724 | - | - | |
Csa04g01354 | 742 | ProSitePatterns | Peroxidases active site signature. | 91 | 102 | IPR019794 | GO:0004601 | |
Csa04g01354 | 742 | SUPERFAMILY | Heme-dependent peroxidases | 59 | 358 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | Pfam | Peroxidase | 76 | 321 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | Pfam | Peroxidase | 442 | 687 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | Gene3D | - | 64 | 358 | - | - | |
Csa04g01354 | 742 | PANTHER | PEROXIDASE 58 | 414 | 724 | - | - | |
Csa04g01354 | 742 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 218 | 228 | IPR019793 | - | |
Csa04g01354 | 742 | ProSitePatterns | Peroxidases active site signature. | 457 | 468 | IPR019794 | GO:0004601 | |
Csa04g01354 | 742 | PANTHER | PEROXIDASE 72-RELATED | 414 | 724 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PANTHER | PEROXIDASE 58 | 48 | 358 | - | - | |
Csa04g01354 | 742 | CDD | secretory_peroxidase | 59 | 357 | IPR033905 | GO:0004601|GO:0042744 | |
Csa04g01354 | 742 | CDD | secretory_peroxidase | 425 | 723 | IPR033905 | GO:0004601|GO:0042744 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 536 | 551 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 640 | 655 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 517 | 527 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 435 | 454 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 498 | 511 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 656 | 673 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 459 | 479 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 583 | 595 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01354 | 742 | PRINTS | Plant peroxidase signature | 698 | 711 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g01354 | Csa-Chr4:13743414 | Csa04g01358 | Csa-Chr4:13768635 | 6.39E-148 | dispersed | |
Csa04g01353 | Csa-Chr4:13735214 | Csa04g01354 | Csa-Chr4:13743414 | 6.35E-135 | tandem | |
Csa04g01354 | Csa-Chr4:13743414 | Csa04g01355 | Csa-Chr4:13754384 | 7.53E-159 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01354 | K00430 | - | csv:101217543 | 662.529 |