Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01355 ATGGGTTCCTTCAGTTTCTTCCTTTCGTTTCTTTGTGTTTTCTTTGTAACCTCTTATGCCCAACTCACTGAGAATTTCTACGACCAAACTTGCCCTCGTCTCCCTAACATTGTCCGCCGTGAAGTCAAAAGAGCTATCGAAACTGATATTCGTGCTGGTGCTAAACTCATTCGCTTCCATTTCCACGATTGTTTCGTCCAAGGCTGCGATGGGTCTGTTTTGCTAGAGGATCCTCCTGGCTTCGAGACCGAGCTCAACGGACTTGGAAACTTAGGAATCCAAGGAATCGAGATTATCGACGCTATCAAAGCTGCCGTCGAGATAGAATGCCCTGGCGTTGTCTCCTGTGCCGACATCCTAGCTCAAGCCTCTAAGGACTCTGTCGACGTGCAAGGAGGACCCAGTTGGAGAGTTCTATACGGCAGAAGAGATAGCAGAACAGCCAATAAAACAGGGGCTGATAACCTCCCAAGCCCCTTCGAAAATCTTGACCCACTCGTAAAAAAATTTGCAGACGTTGGTTTAAATGAAACCGACCTTGTTGCTCTATCAGGGGCACATACGTTTGGTCGGTCCAGATGCGTGTTCTTCAGTGGTCGTTTGTCCAACTTCAGTGGCAGTGGGCAACCAGATCCAACGCTGGATCCAACTTACAGGCAAGAACTTCTAAGCGCTTGTACAAGCCAAGACACACGAGTGAATTTCGATCCAACAACACCTGATAAATTTGATAAGAATTACTTCACCAATCTTCGAGCCAATAAAGGGCTGTTACAGAGTGACCAAGTTCTGCATTCAACGCAAGGGGCTAAAACAGTTGAAATTGTTAGACTTATGGCGTTGAAACAAGAAACTTTCTTTAGACAATTTCGGTTGTCGATGATTAAGATGGGGAACATTAAACCATTAACTGGAAGCCAAGGGGAAATTAGAAGAAACTGCAGGAGGGTTAATGACTTGGGAAGTGAAACAGGGCATGATGTTATGTAA 990 45.45 MGSFSFFLSFLCVFFVTSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDPPGFETELNGLGNLGIQGIEIIDAIKAAVEIECPGVVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANKTGADNLPSPFENLDPLVKKFADVGLNETDLVALSGAHTFGRSRCVFFSGRLSNFSGSGQPDPTLDPTYRQELLSACTSQDTRVNFDPTTPDKFDKNYFTNLRANKGLLQSDQVLHSTQGAKTVEIVRLMALKQETFFRQFRLSMIKMGNIKPLTGSQGEIRRNCRRVNDLGSETGHDVM* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13754384 13756326 - CsaV3_4G023630.1 Csa04g01355 526965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01355 329 PANTHER PEROXIDASE 58 12 318 - -
Csa04g01355 329 Pfam Peroxidase 38 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PANTHER PEROXIDASE 72-RELATED 12 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Csa04g01355 329 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 CDD secretory_peroxidase 21 317 IPR033905 GO:0004601|GO:0042744
Csa04g01355 329 Gene3D - 26 318 - -
Csa04g01355 329 Gene3D Peroxidase, domain 2 157 297 - -
Csa04g01355 329 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01355 329 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01355 Csa-Chr4:13754384 Csa04g01359 Csa-Chr4:13774922 4.00E-138 dispersed
Csa04g01354 Csa-Chr4:13743414 Csa04g01355 Csa-Chr4:13754384 7.53E-159 tandem
Csa04g01355 Csa-Chr4:13754384 Csa04g01356 Csa-Chr4:13758481 6.19E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01355 K00430 - csv:101212230 573.548