Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01355 | ATGGGTTCCTTCAGTTTCTTCCTTTCGTTTCTTTGTGTTTTCTTTGTAACCTCTTATGCCCAACTCACTGAGAATTTCTACGACCAAACTTGCCCTCGTCTCCCTAACATTGTCCGCCGTGAAGTCAAAAGAGCTATCGAAACTGATATTCGTGCTGGTGCTAAACTCATTCGCTTCCATTTCCACGATTGTTTCGTCCAAGGCTGCGATGGGTCTGTTTTGCTAGAGGATCCTCCTGGCTTCGAGACCGAGCTCAACGGACTTGGAAACTTAGGAATCCAAGGAATCGAGATTATCGACGCTATCAAAGCTGCCGTCGAGATAGAATGCCCTGGCGTTGTCTCCTGTGCCGACATCCTAGCTCAAGCCTCTAAGGACTCTGTCGACGTGCAAGGAGGACCCAGTTGGAGAGTTCTATACGGCAGAAGAGATAGCAGAACAGCCAATAAAACAGGGGCTGATAACCTCCCAAGCCCCTTCGAAAATCTTGACCCACTCGTAAAAAAATTTGCAGACGTTGGTTTAAATGAAACCGACCTTGTTGCTCTATCAGGGGCACATACGTTTGGTCGGTCCAGATGCGTGTTCTTCAGTGGTCGTTTGTCCAACTTCAGTGGCAGTGGGCAACCAGATCCAACGCTGGATCCAACTTACAGGCAAGAACTTCTAAGCGCTTGTACAAGCCAAGACACACGAGTGAATTTCGATCCAACAACACCTGATAAATTTGATAAGAATTACTTCACCAATCTTCGAGCCAATAAAGGGCTGTTACAGAGTGACCAAGTTCTGCATTCAACGCAAGGGGCTAAAACAGTTGAAATTGTTAGACTTATGGCGTTGAAACAAGAAACTTTCTTTAGACAATTTCGGTTGTCGATGATTAAGATGGGGAACATTAAACCATTAACTGGAAGCCAAGGGGAAATTAGAAGAAACTGCAGGAGGGTTAATGACTTGGGAAGTGAAACAGGGCATGATGTTATGTAA | 990 | 45.45 | MGSFSFFLSFLCVFFVTSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDPPGFETELNGLGNLGIQGIEIIDAIKAAVEIECPGVVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANKTGADNLPSPFENLDPLVKKFADVGLNETDLVALSGAHTFGRSRCVFFSGRLSNFSGSGQPDPTLDPTYRQELLSACTSQDTRVNFDPTTPDKFDKNYFTNLRANKGLLQSDQVLHSTQGAKTVEIVRLMALKQETFFRQFRLSMIKMGNIKPLTGSQGEIRRNCRRVNDLGSETGHDVM* | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13754384 | 13756326 | - | CsaV3_4G023630.1 | Csa04g01355 | 526965 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01355 | 329 | PANTHER | PEROXIDASE 58 | 12 | 318 | - | - | |
Csa04g01355 | 329 | Pfam | Peroxidase | 38 | 277 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PANTHER | PEROXIDASE 72-RELATED | 12 | 318 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Haem peroxidase superfamily signature | 53 | 67 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Haem peroxidase superfamily signature | 114 | 131 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Haem peroxidase superfamily signature | 132 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Haem peroxidase superfamily signature | 179 | 194 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Haem peroxidase superfamily signature | 236 | 251 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | SUPERFAMILY | Heme-dependent peroxidases | 21 | 318 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 179 | 189 | IPR019793 | - | |
Csa04g01355 | 329 | ProSiteProfiles | Plant heme peroxidase family profile. | 21 | 318 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | CDD | secretory_peroxidase | 21 | 317 | IPR033905 | GO:0004601|GO:0042744 | |
Csa04g01355 | 329 | Gene3D | - | 26 | 318 | - | - | |
Csa04g01355 | 329 | Gene3D | Peroxidase, domain 2 | 157 | 297 | - | - | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 31 | 50 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 55 | 75 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 94 | 107 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 113 | 123 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 132 | 147 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 178 | 190 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 234 | 249 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 250 | 267 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01355 | 329 | PRINTS | Plant peroxidase signature | 292 | 305 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g01355 | Csa-Chr4:13754384 | Csa04g01359 | Csa-Chr4:13774922 | 4.00E-138 | dispersed | |
Csa04g01354 | Csa-Chr4:13743414 | Csa04g01355 | Csa-Chr4:13754384 | 7.53E-159 | tandem | |
Csa04g01355 | Csa-Chr4:13754384 | Csa04g01356 | Csa-Chr4:13758481 | 6.19E-130 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01355 | K00430 | - | csv:101212230 | 573.548 |