Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01356 | ATGTTTGCACAAAGTTTCTTATCCCCAAAGCAAAGACCAGAGAAGACCCCATTTGCAGTATCAAAAATGGGTTTACCTAAAATGGCAGCCATTGTTGTGGTGGTGGCTTTGATGCTATCACCCTCTCAAGCCCAGCTTTCTCCTTTCTTCTACGCCACCACATGCCCTCAGCTGCCTTTCGTTGTTCTCAACGTGGTTGCCCAAGCCCTACAGACTGATGACCGAGCTGCTGCTAAGCTCATTCGCCTCCATTTTCATGATTGCTTTGTCAATGGGTGTGATGGATCGATTCTATTGGTAGACGTACCGGGCGTTATCGATAGTGAACTTAATGGACCTCCAAATGGTGGAATCCAAGGAATGGACATTGTGGACAACATCAAAGCAGCAGTTGAGAGTGCTTGTCCAGGAGTTGTTTCTTGCGCTGATATCTTAGCCATTTCATCTCAAATCTCTGTTTTCTTGTCGGGAGGACCAATTTGGGTTGTACCAATGGGAAGAAAAGACAGCAGAATAGCCAATAGAACTGGAACCTCAAACTTACCTGGTCCCTCAGAAACTCTAGTGGGACTTAAAGGCAAGTTTAAAGATCAAGGGCTTGATTCTACAGATCTCGTGGCTCTATCAGGAGCCCACACGTTTGGAAAATCAAGATGCATGTTCTTCAGTGACCGCCTCATCAACTTCAACGGCACAGGAAGACCCGACACAACGCTTGACCCAATATACAGGGAGCAGCTTCGAAGACTTTGTACTACTCAACAAACACGAGTAAATTTCGACCCAGTCACACCCACTAGATTTGACAAGACCTATTACAACAATTTGATTAGCTTAAGAGGGCTTCTCCAAAGCGACCAAGAGCTCTTCTCAACTCCCAGAGCTGATACCACAGCCATTGTCAGAACTTTTGCTGCCAACGAACGTGCCTTCTTTAAACAATTTGTGAAATCAATGATCAAAATGGGCAACCTCAAGCCTCCCCCTGGCATTGCATCAGAAGTTAGATTGGACTGTAAGAGGGTCAACCCAGTCAGAGCCTACGACGTTATGTAA | 1056 | 45.74 | MFAQSFLSPKQRPEKTPFAVSKMGLPKMAAIVVVVALMLSPSQAQLSPFFYATTCPQLPFVVLNVVAQALQTDDRAAAKLIRLHFHDCFVNGCDGSILLVDVPGVIDSELNGPPNGGIQGMDIVDNIKAAVESACPGVVSCADILAISSQISVFLSGGPIWVVPMGRKDSRIANRTGTSNLPGPSETLVGLKGKFKDQGLDSTDLVALSGAHTFGKSRCMFFSDRLINFNGTGRPDTTLDPIYREQLRRLCTTQQTRVNFDPVTPTRFDKTYYNNLISLRGLLQSDQELFSTPRADTTAIVRTFAANERAFFKQFVKSMIKMGNLKPPPGIASEVRLDCKRVNPVRAYDVM* | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13758481 | 13760380 | - | CsaV3_4G023640.1 | Csa04g01356 | 526966 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01356 | 351 | CDD | secretory_peroxidase | 45 | 342 | IPR033905 | GO:0004601|GO:0042744 | |
Csa04g01356 | 351 | Pfam | Peroxidase | 64 | 307 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 55 | 74 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 79 | 99 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 119 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 138 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 157 | 172 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 203 | 215 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 259 | 274 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 275 | 292 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Plant peroxidase signature | 317 | 330 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | ProSitePatterns | Peroxidases active site signature. | 77 | 88 | IPR019794 | GO:0004601 | |
Csa04g01356 | 351 | PANTHER | PEROXIDASE 72-RELATED | 34 | 343 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | SUPERFAMILY | Heme-dependent peroxidases | 45 | 344 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Haem peroxidase superfamily signature | 77 | 91 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Haem peroxidase superfamily signature | 139 | 156 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Haem peroxidase superfamily signature | 157 | 169 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Haem peroxidase superfamily signature | 204 | 219 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PRINTS | Haem peroxidase superfamily signature | 261 | 276 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | Gene3D | Peroxidase, domain 2 | 182 | 322 | - | - | |
Csa04g01356 | 351 | ProSiteProfiles | Plant heme peroxidase family profile. | 45 | 343 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01356 | 351 | PANTHER | PEROXIDASE 58 | 34 | 343 | - | - | |
Csa04g01356 | 351 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 204 | 214 | IPR019793 | - | |
Csa04g01356 | 351 | Gene3D | - | 50 | 343 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g01356 | Csa-Chr4:13758481 | Csa04g01358 | Csa-Chr4:13768635 | 2.13E-135 | dispersed | |
Csa04g01355 | Csa-Chr4:13754384 | Csa04g01356 | Csa-Chr4:13758481 | 6.19E-130 | tandem | |
Csa04g01356 | Csa-Chr4:13758481 | Csa04g01357 | Csa-Chr4:13764077 | 8.26E-169 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01356 | K00430 | - | csv:101211989 | 651.744 |