Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01357 ATGGCTTCCCCTAAACTTACACCCTTTGTTGCAGTGGTAGCTTTGATGCTTGCTCCCTCTCTCGCTCAGCTTAACCCTTTCTTCTACACCTTCACTTGCCCTCAACTACCTTTCATTGTTCTAAATACAGTCTCTCAAGCTCTCCAAACCGACGACCGAGCTGCTGCCAAGCTCATTCGTCTCCACTTCCATGACTGCTTTGCCAATGGGTGTGATGGATCTGTGCTATTGGAAGACGTACCTGGTGTTATCGACAGTGAATTGAACGCAGCTCCAAACAATGGAATCCAAGGGTTAGACATTGTGGACAACATCAAAGCAGCAGTTGAAAGCGCATGTCCAGGCGTTGTTTCTTGTGCTGACATATTAGCCCTCTCATCTCAAGTGTCTGTTGTGCTGTCTGGAGGGCCAGCATGGATCGTCCCATTGGGAAGAAAAGACAGTAGAATAGCAAATAGAGCCGCAGCTGCAAATCTGCCAAGTCCATTCGAAACTCTAGACGTGCTGAAATCCAAATTTGCAGCCTTCGGGATGAGTTCTACGGACCTTGTGACCCTATCGGGAGCGCACACATTCGGTCGAGCAAGATGTTTCTTCTTCACAGGACGGTTCGACAACTTCAACAACACTGGCCTACCCGACCCGACTCTAGACGCCGCATACAGGGAGCAGCTACGCCAACTTTGTGCCACTCCAGTAACAAGAGTAAACTTTGATCCAACCACACCAGACACATTCGATAAAAACTATTACACTAATCTCCAAAACCATAAAGGGCTTCTCCAAAGTGATCAAGAGCTTTTCTCAACCCCTGGGGCCGATACAATTGGCATTGTCAACACATTTGCTGCTAGTCAGCTTCTGTTCTTTATTCAATTTGGGAATTCCATGATCAAAATGGGGAATCTTGGCCCTCCGCCTGGCACCCCATCTGAAGTCAGATTGAACTGCAGGAAGATCAACCCACCCACGACCTTCCATGATGTTATCTAA 993 47.73 MASPKLTPFVAVVALMLAPSLAQLNPFFYTFTCPQLPFIVLNTVSQALQTDDRAAAKLIRLHFHDCFANGCDGSVLLEDVPGVIDSELNAAPNNGIQGLDIVDNIKAAVESACPGVVSCADILALSSQVSVVLSGGPAWIVPLGRKDSRIANRAAAANLPSPFETLDVLKSKFAAFGMSSTDLVTLSGAHTFGRARCFFFTGRFDNFNNTGLPDPTLDAAYREQLRQLCATPVTRVNFDPTTPDTFDKNYYTNLQNHKGLLQSDQELFSTPGADTIGIVNTFAASQLLFFIQFGNSMIKMGNLGPPPGTPSEVRLNCRKINPPTTFHDVI* 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13764077 13765668 - CsaV3_4G023650.1 Csa04g01357 526967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01357 330 Gene3D - 28 321 - -
Csa04g01357 330 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PANTHER PEROXIDASE 58 15 321 - -
Csa04g01357 330 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Csa04g01357 330 Gene3D Peroxidase, domain 2 160 300 - -
Csa04g01357 330 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PANTHER PEROXIDASE 72-RELATED 15 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601|GO:0042744
Csa04g01357 330 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01357 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01357 Csa-Chr4:13764077 Csa04g01359 Csa-Chr4:13774922 1.54E-138 dispersed
Csa04g01356 Csa-Chr4:13758481 Csa04g01357 Csa-Chr4:13764077 8.26E-169 tandem
Csa04g01357 Csa-Chr4:13764077 Csa04g01358 Csa-Chr4:13768635 3.72E-150 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01357 K00430 - csv:101211752 661.759