Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01358 ATGATTAAAATGGATTCTTCTAACTCTCCACTATTCTTCCCATTGTTTTGCTTATTGGGTTTCCTGGTGGGACACTCTTTGGCTCAACTAAACCCTTCATTTTACGCCAAAACATGTCCTAATTTACCTAATATTGTGAATGCTGTCGTTGCTAAGGCTCTGCAAACCGATGCTCGAGCTGGAGCCAAGCTAATTCGTCTCCATTTTCATGACTGCTTTGTTGACGGGTGTGATGCGTCTGTTTTGCTAGAGAATGCACCAGGCATAGACAGTGAACTAGATGCCCCTGGAAATCAAGGCATTCAAGGTCTTAACATTGTCGATGACATCAAATCCGCTGTTGAAAAGGCTTGCCCTCGCACTGTCTCTTGTGCTGACATCTTAGCCATTGCCTCCAAAGAATCCGTCGTATTGGCTGGAGGGCCGAGCTGGGTTGTGCCATTAGGACGAAGAGACAGCAGAACAGCGAATAAAGAAGGAGCCACAAACAACCTCGCCAGTCCCTTTGAAGATCTCAATGCACTCAAAGCCAAATTTGGTGCTTTCGGTCTCAATTCCACTGATCTCGTGGCTTTGTCTGGAGCACATACATTTGGGCGTTCAAGGTGCGCATTTTTCAGCCAAAGATTCGACACGCCAGACCCAACGCTGGACCCAGCCTACAGAGAGCAGCTCAAAAGAATTTGCTCAAGTGGGTCAGAGACAAGAGCCAATTTTGATCCGACGACTCCAGACACATTTGACAAAAACTATTACACGAACCTTCAAGGGCTAAGAGGACTTTTGGAGAGTGATCAAGTACTGTTCTCAACTAGTGGGGCTGACACGGTGGGGATTGTGAACCGGTTTGCCAAAAAGCAAGGCGAGTTTTTCAAAAGTTTTGGTCAGTCTATGATCAAAATGGGAAATATTACTCCTTTAACCGGAAACAAAGGAGAGATTAGATTGAATTGTAGGAGGGTTAATCCAAGAAGGCCTAGAAGTACTGATGAAGGTCGTGATTTTATGTAA 1011 45.2 MIKMDSSNSPLFFPLFCLLGFLVGHSLAQLNPSFYAKTCPNLPNIVNAVVAKALQTDARAGAKLIRLHFHDCFVDGCDASVLLENAPGIDSELDAPGNQGIQGLNIVDDIKSAVEKACPRTVSCADILAIASKESVVLAGGPSWVVPLGRRDSRTANKEGATNNLASPFEDLNALKAKFGAFGLNSTDLVALSGAHTFGRSRCAFFSQRFDTPDPTLDPAYREQLKRICSSGSETRANFDPTTPDTFDKNYYTNLQGLRGLLESDQVLFSTSGADTVGIVNRFAKKQGEFFKSFGQSMIKMGNITPLTGNKGEIRLNCRRVNPRRPRSTDEGRDFM* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13768635 13770198 - CsaV3_4G023660.1 Csa04g01358 526968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01358 336 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
Csa04g01358 336 Gene3D - 34 322 - -
Csa04g01358 336 ProSiteProfiles Plant heme peroxidase family profile. 29 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 Gene3D Peroxidase, domain 2 166 301 - -
Csa04g01358 336 PANTHER PEROXIDASE 72-RELATED 21 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 SUPERFAMILY Heme-dependent peroxidases 29 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Csa04g01358 336 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Csa04g01358 336 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 Pfam Peroxidase 46 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PANTHER PEROXIDASE 58 21 322 - -
Csa04g01358 336 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g01358 336 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01353 Csa-Chr4:13735214 Csa04g01358 Csa-Chr4:13768635 1.25E-145 dispersed
Csa04g01354 Csa-Chr4:13743414 Csa04g01358 Csa-Chr4:13768635 6.39E-148 dispersed
Csa04g01356 Csa-Chr4:13758481 Csa04g01358 Csa-Chr4:13768635 2.13E-135 dispersed
Csa04g01358 Csa-Chr4:13768635 Csa05g00500 Csa-Chr5:3226466 1.58E-136 dispersed
Csa04g01357 Csa-Chr4:13764077 Csa04g01358 Csa-Chr4:13768635 3.72E-150 tandem
Csa04g01358 Csa-Chr4:13768635 Csa04g01359 Csa-Chr4:13774922 4.27E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01358 K00430 - csv:101211507 666.381