Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01360 | ATGGAAATTATCTCAACCAGCAGAATGAAGAGAAGTTTTTCTTTGGTTATGATCATGATAATTTTTTTCATGATTTGTGGTTCCACTAGTTCTCAATTAACTGTAGATTTCTACAGAAGATCGTGTCCAAATGTTCTCAGAATCGTGAGGAGAGAAGTCATCAATGCTCTCAAGAACGATATGCGAATGGCTGCTTCCCTTCTTCGCCTCCATTTTCACGACTGCTTTGTTAGCGGTTGCGACGCGTCTGTGCTGTTGGATGGGAGTGATGGGGAGCAAAATGCACTTCCCAACATCAATTCTCTGAGAGGGCTTGAAGTTATGGATAACATCAAAGCAGTAGTGGAGAATTCATGTCCGGGAGTTGTATCTTGTGCTGATATATTAACCATAGCTGCCAGAGATTCTGTTCTCTTGAGCGGAGGACCGGCATGGAAAGTATTATTGGGGAGAAGAGATGGATTGGTAGCGAATAGAACAGGAGCCGAGGAACTTCCTTCTCCATTTGAAAGCCTTGATGGTATCATCAAGAAATTCATTCAAGTTGGGCTCAATGTGACTGACGTCGCGGCTTTATCTGGAGCTCATACATTTGGATTTGCAAGATGTGCGATGTTCAACAATAGGCTGTTCAACTTCTCAGGAAGTGATTCTCCAGACCCAACCATGGAGTCCATGATGGTATCTGATCTTCAAGCTCTCTGCCCTCTCACCGATGACGGCAACAAGACCACTGTTCTCGACCGAAACTCAACCGATTTATTTGACAACCATTACTACAAGAACTTGCTGAACCAAAAGGGGCTGTTGGCGTCCGACCAGATCCTGTTCTCAAGCGATGAAGCTCAAACCACTACAAAACCGTTGGTCGAAGCTTATAGCTCAAACACTACGCTTTTCTTCAGCGACTTTGTTAAAGCCATGATCAAGATGGGGAATATGAGCCCACTCACTGGCTCCAATGGACAGATTCGAAACAACTGCGGAATCGTTAATTCCTCTTAG | 1005 | 44.28 | MEIISTSRMKRSFSLVMIMIIFFMICGSTSSQLTVDFYRRSCPNVLRIVRREVINALKNDMRMAASLLRLHFHDCFVSGCDASVLLDGSDGEQNALPNINSLRGLEVMDNIKAVVENSCPGVVSCADILTIAARDSVLLSGGPAWKVLLGRRDGLVANRTGAEELPSPFESLDGIIKKFIQVGLNVTDVAALSGAHTFGFARCAMFNNRLFNFSGSDSPDPTMESMMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYYKNLLNQKGLLASDQILFSSDEAQTTTKPLVEAYSSNTTLFFSDFVKAMIKMGNMSPLTGSNGQIRNNCGIVNSS* | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 13778724 | 13780954 | - | CsaV3_4G023680.1 | Csa04g01360 | 526970 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01360 | 334 | CDD | secretory_peroxidase | 32 | 331 | IPR033905 | GO:0004601|GO:0042744 | |
Csa04g01360 | 334 | Gene3D | Peroxidase, domain 2 | 166 | 314 | - | - | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 42 | 61 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 66 | 86 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 103 | 116 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 122 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 141 | 156 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 246 | 261 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 262 | 279 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Plant peroxidase signature | 306 | 319 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | Gene3D | - | 38 | 332 | - | - | |
Csa04g01360 | 334 | PRINTS | Haem peroxidase superfamily signature | 64 | 78 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Haem peroxidase superfamily signature | 123 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Haem peroxidase superfamily signature | 141 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PRINTS | Haem peroxidase superfamily signature | 248 | 263 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PANTHER | PEROXIDASE 72-RELATED | 14 | 331 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - | |
Csa04g01360 | 334 | SUPERFAMILY | Heme-dependent peroxidases | 32 | 332 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | Pfam | Peroxidase | 49 | 295 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | PANTHER | PEROXIDASE 59 | 14 | 331 | - | - | |
Csa04g01360 | 334 | ProSiteProfiles | Plant heme peroxidase family profile. | 32 | 332 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g01360 | 334 | ProSitePatterns | Peroxidases active site signature. | 64 | 75 | IPR019794 | GO:0004601 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g01200 | Csa-Chr2:11798159 | Csa04g01360 | Csa-Chr4:13778724 | 2.81E-100 | dispersed | |
Csa04g01360 | Csa-Chr4:13778724 | Csa06g02923 | Csa-Chr6:25335342 | 5.35E-123 | dispersed | |
Csa05g00500 | Csa-Chr5:3226466 | Csa04g01360 | Csa-Chr4:13778724 | 4.88E-96 | dispersed | |
Csa04g01359 | Csa-Chr4:13774922 | Csa04g01360 | Csa-Chr4:13778724 | 4.99E-102 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01360 | K00430 | - | csv:101211257 | 661.373 |