Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01412 ATGGAGAATTTGGAGGTGAAGTTAGAGGAAACAAGAGAGTATTTCAAAAGTGGAAAAACAAAGGAAGCATCATGGAGATTTTCTCAACTTAAAGGTTTACACAAATTTCTTAACCAAAATCAGCAACAAATTTACAATGCCCTTTTCCAAGATTTGGGGAAACACCATGTTGAAGCTTTTAGAGATGAGATTGGTAATCTACAAATGTCCCTCAACTTTGCTTTGGAAAATTTGAAACACTGGATGTCCCCCAGAAAGGCAAAGTTGCCGGCGATTGCTGTGTTGAATTCAGCAGAAGTGGTTCCGGAGCCTTTGGGGGTTGTTCTTGTGATCTCATCTTGGAACTTTCCGTTTGGGTTGTCGTTGGAGCCATTGATAGGGGCAATAGCAGCTGGGAATTGTGTGTTTTTGAAGACGTCGGAGTTTGCTCCGGCGAGTTCAGCTTTTTTGGCGAAAGTGATCGGAGATTACGTTGATGATAAAGCAGTGAGAGTGGTTGAAGGAGGGGCGGCGACCGGAGAGCGGCTGCTGCAGCTGCGGTGGCAGAAGATTTTCTTTACAGGAAGTGAAAGAGTGGGGAGGATTGTTATGGCGGCCGCCGTGAAACACCTAACGCCGGTGACTTTGGAGCTCGGAGGTAAATGCCCCGCCATTGTTGACTCACTTTCATGTTCATGGGATATCGAGTCTACTGCTCAACGGATCGTTATCGGAAAATTTGGAGCCTGCGCCGGTCAAGCTTGCGTAGCTATCGATTATGTCCTTGTTGAACACAAATTTATATCCACCTTGGTCGAATTGCTGAAGAAGTACATCAAGAAATTCTTCGATAAAGGTTCGAACCAAGCGAAAACCATGGCGAGAATCGTAAACAAACAAAATTTATTGAGATTGAAGAATATGGTGGATGAACCTGCTGTCCAAGCTACAATCATCTATGGAGGATCCATGGACGAGGAAAAATTGTTTGTTGAGCCGACTATTCTGTTGAACCCACCAATTGATGCAGAAATTATGAGAGAAGAAATATTTGGACCAATCCTTCCCATAATTGGAATGGACAAGATTGAAGACAGTATAGATTTCATCAATTCAAGGCCTAAGCCTCTTGCCATTTATGCCTTCACAAAAGACAAAGCTTTCCAAAGAAGACTCGTCTCAGAAACTACGTCCGGCAGCTTGACATTTAATGATGCAATTATTCAGTATGCAGTGGATACACTCCCGTTTGGAGGGGTTGGTGAAAGTGGGATTGGCAGATACCATGGAAAATTCTCATTCGACACCTTTAGTCATGAAAAGGCAATTGTGAAAAGGAGCTTATTGATCGACTTCTGGTTCAGATATCCGCCCTGGAACAATCACAAGCTTCAGCTGCTTAGACATGCTTATAATTTTAACTATTTTCAGTTAGTCCTCACTGTTTTGGGTCTGAAAAGGTCTTAA 1446 43.02 MENLEVKLEETREYFKSGKTKEASWRFSQLKGLHKFLNQNQQQIYNALFQDLGKHHVEAFRDEIGNLQMSLNFALENLKHWMSPRKAKLPAIAVLNSAEVVPEPLGVVLVISSWNFPFGLSLEPLIGAIAAGNCVFLKTSEFAPASSAFLAKVIGDYVDDKAVRVVEGGAATGERLLQLRWQKIFFTGSERVGRIVMAAAVKHLTPVTLELGGKCPAIVDSLSCSWDIESTAQRIVIGKFGACAGQACVAIDYVLVEHKFISTLVELLKKYIKKFFDKGSNQAKTMARIVNKQNLLRLKNMVDEPAVQATIIYGGSMDEEKLFVEPTILLNPPIDAEIMREEIFGPILPIIGMDKIEDSIDFINSRPKPLAIYAFTKDKAFQRRLVSETTSGSLTFNDAIIQYAVDTLPFGGVGESGIGRYHGKFSFDTFSHEKAIVKRSLLIDFWFRYPPWNNHKLQLLRHAYNFNYFQLVLTVLGLKRS* 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14136883 14142644 - CsaV3_4G024200.1 Csa04g01412 527022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01412 481 PANTHER ALDEHYDE DEHYDROGENASE 7 481 - -
Csa04g01412 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Csa04g01412 481 PIRSF ALDH 1 476 IPR012394 GO:0006081
Csa04g01412 481 PANTHER ALDEHYDE DEHYDROGENASE 7 481 IPR012394 GO:0006081
Csa04g01412 481 Pfam Aldehyde dehydrogenase family 8 435 IPR015590 GO:0016491
Csa04g01412 481 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Csa04g01412 481 SUPERFAMILY ALDH-like 8 454 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00526 Csa-Chr4:3464064 Csa04g01412 Csa-Chr4:14136883 0 dispersed
Csa04g01412 Csa-Chr4:14136883 Csa04g01789 Csa-Chr4:17543635 1.22E-158 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01412 K00128 - csv:101205263 952.584