Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01511 ATGGCGGCCATCGTCTTCCTCACCTTAATACTTTTGATTTCCATTTCTCCAGCTTCTGCAGATCAAAGATTCATCTTTAATGGCTTCAATTTCGGCGATCTCTTCCTCGACGGCGTCGCCGAAGTAACCTCCGATCGTCTTTTGAGACTCACCAACGACTACGACCAACAAATCGGCCATGCCTTTTACCCCAATCCCATCTCCTTCAAAACCCCATCAAACAATAATTCCTCGCTTTCTTCCTTCTCTGCATCTTTCGTCTTTGCTATAATCTCAGAATATGACGATCTCGGCGGCCATGGAATCGCCTTCGTCGTTTCTCCGACTAGAGGACTCCCCGGAGCTCGCCCAAGCGAAAACCTCGGTCTATTCAACGAGTCCAACAACGGGAAAGAGACGAATCATATCTTCGCCGTTGAACTCGACACGATTCAGAATCTCGATCTTAGAGACATCAACAGGAACCACGTCGGAATCAATATAAACGGATTAATGTCAGAACAATCGGAGCGAGCAGGGTATTGGGTCGACGGAGAATTTAGAAATTTGACGCTAATCAGTGGCGAACGGATGCAAGTTTGGATTGAATACGATGGACTCAAAAAGCAAATTAACGTTACCCTGGCTCCAATTGAAATCAGAGATAAACCCAAAATCCCTCTCTTATCTTACCGGCGAGACTTATCGTCCGTCATCAACGACATCATGTACATCGGATTCTCGTCCTCAACGGGCTCCATTACGACGTTGCATTACGTTTTAGCTTGGAGTTTCAACGTCAATGGCGAAGCACAGAAGATTAATCTGTCTCAACTCCCCAAGCTTCCACCACGTACAAAAAAAAAACCGAGCCGATCCAAATTGTTAACAATAGGTTTGCCGTTGGTTTGCGTTGCATTAGCTTTAATGACAGTTTTGGGGTTGATTTATTTCATATACCGGAGACGGAAATTCGCAGAGATTCTAGAGGATTGGGAGCTGGAATACGGACCGCAAAGATTCAAATACAAGGATTTATACAAAGCAACAAAGGGATTCAGAGAAAAAGAATTTCTGGGATTTGGTGGATTCGGTAGAGTATACAAAGGGGTATTACCAAATTCGAAAATCGAAGTAGCGGTGAAGAGAATCTCTCACGAATCAAGACAGGGGATGAAGGAATTCGTGGCGGAGATAGTGAGTGTAGGGAGGCTCCGGCACCGGAACCTGGTGGCGCTGTTGGGGTATTGCCGGAGGAAAGGAGAGCTGTTTTTGGTGTATGATTATATGAGAAATGGAAGCTTGGATGCGTATTTACACGAGTGGCCAGAGATAACGATAAATTGGGAACAGAGGTTTGAGATAATAAAAGGAGTTGCGTCGGGATTGTTCTATCTTCATGAACAGTGTGAGAAAGTGGTGATTCATAGAGATGTGAAAGCGAGTAATGTGCTGCTTGACGATGAGTTTAATGGAAGATTGGGGGATTTTGGTTTGGCTAAAATGTACGATCGTGGTGCTGATCCTCGAACCACTCATGTCGTTGGAACTCTTGGGTATCTAGCGCCAGAGCATATAAGAACAGGGAGAGCCACAACAAGAACAGACGTTTACGCATTTGGGGCTTTTCTTCTTGAAGTGGCCTGTGGAAGAAGGCCTATTCATCCTCAAGAAGACTCCGACGATTTCATTTTAATGGATTGGGTTTTCTCTTGTTGGTCCAACGGCAACATTCTCCGGACCGCCGACCCCAAATTGGGTGGCAACTTCGAACCTTCACAGCTCGAATTGGTTCTCAAACTCGGGTTGCTCTGTTCTCACTCCTCCCCTGCCGTTCGGCCCACCATGTATCAGGTTCTGCAGTATTTGCAGGCCGAAGCGCCGCTGCCGGACCTCGCCTCCCTCCGCTGGCGCCTTTCCGGAAATGGGTTTTTCAATTTGACGCCTCGCGACGGCGATGAGTTGGATGATTTTACCGGGTCTTATCCGCTATCGAGAGAAAGGAATGTGACGAGCTCTTCATCGGTTGCGGAGTCTATTCTGTCGGAAGGCCGCTGA 2037 46.83 MAAIVFLTLILLISISPASADQRFIFNGFNFGDLFLDGVAEVTSDRLLRLTNDYDQQIGHAFYPNPISFKTPSNNNSSLSSFSASFVFAIISEYDDLGGHGIAFVVSPTRGLPGARPSENLGLFNESNNGKETNHIFAVELDTIQNLDLRDINRNHVGININGLMSEQSERAGYWVDGEFRNLTLISGERMQVWIEYDGLKKQINVTLAPIEIRDKPKIPLLSYRRDLSSVINDIMYIGFSSSTGSITTLHYVLAWSFNVNGEAQKINLSQLPKLPPRTKKKPSRSKLLTIGLPLVCVALALMTVLGLIYFIYRRRKFAEILEDWELEYGPQRFKYKDLYKATKGFREKEFLGFGGFGRVYKGVLPNSKIEVAVKRISHESRQGMKEFVAEIVSVGRLRHRNLVALLGYCRRKGELFLVYDYMRNGSLDAYLHEWPEITINWEQRFEIIKGVASGLFYLHEQCEKVVIHRDVKASNVLLDDEFNGRLGDFGLAKMYDRGADPRTTHVVGTLGYLAPEHIRTGRATTRTDVYAFGAFLLEVACGRRPIHPQEDSDDFILMDWVFSCWSNGNILRTADPKLGGNFEPSQLELVLKLGLLCSHSSPAVRPTMYQVLQYLQAEAPLPDLASLRWRLSGNGFFNLTPRDGDELDDFTGSYPLSRERNVTSSSSVAESILSEGR* 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14785016 14788501 - CsaV3_4G025190.1 Csa04g01511 527121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01511 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 280 IPR013320 -
Csa04g01511 678 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 6 660 - -
Csa04g01511 678 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Csa04g01511 678 Gene3D Transferase(Phosphotransferase) domain 1 423 629 - -
Csa04g01511 678 SUPERFAMILY Protein kinase-like (PK-like) 327 621 IPR011009 -
Csa04g01511 678 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Csa04g01511 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Csa04g01511 678 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa04g01511 678 CDD STKc_IRAK 352 617 - -
Csa04g01511 678 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa04g01511 678 Gene3D - 21 274 - -
Csa04g01511 678 MobiDBLite consensus disorder prediction 659 678 - -
Csa04g01511 678 PANTHER - 6 660 - -
Csa04g01511 678 Pfam Legume lectin domain 22 273 IPR001220 GO:0030246
Csa04g01511 678 Pfam Protein kinase domain 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa04g01511 678 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03164 Csa04g01511 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03164 Csa-Chr3:29333338 Csa04g01511 Csa-Chr4:14785016 0 dispersed
Csa04g01511 Csa-Chr4:14785016 Csa07g00449 Csa-Chr7:3219558 9.46E-154 dispersed
Csa04g01511 Csa-Chr4:14785016 Csa04g01513 Csa-Chr4:14803634 0 proximal
Csa03g03162 Csa-Chr3:29326367 Csa04g01511 Csa-Chr4:14785016 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78158 PF00069 Pkinase 2.40E-47 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01511 - - csv:101205439 1318.52