Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01548 ATGCCCATTCTCCCAATTTCTCTCGCAATTTCAATCCCTTCTCGTCCGCCCTTATTCTCCTTCTCTCAGTCTCTAACTGGTTCAAACCACCTCTCATACCTTCCCAATCGGATGCCGATCCTCACAAAGACCACACCACTTATTCGTATGGGCGGAGGTCCTAGAACTTATCCCGGTGGAGTGTCGAAGTGGCAATGGAAGCGGATGCAGGCCAAGAAAGGTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGTGAACGCCAGATATACGAGATGCGTAAGCGGGCTGAGCTTAAGGCGGCTGTATCCCAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCCAATTTGTTCTCTGTTGGCGCCGATGAACAGGTGAAGGTTTTGGCAGATAGGTTTCAAAGGCCTGGTGGGTTCGATTTGTGGACGGAAAGAGATGGGCCTCAATTGTTTGAGACGGTTGACGAACTACCTTCTGCAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTGTAAGGCCATATAGAAGTATTACAGGGTCGGAGAGTTCGTTGAGTTTGGATTCGGAAGCTGGCAATGAAATTCCAACTACTTTTCAAGAAGATAATTTTAGGACTCACCGGAGGTCTTCTAACCGGACATTGAGAAGTTTTTCTGTGGATAAAGGGGAAGATAACACAAATTACTCGGATACAGAGGGTTCTTATCCTCGGCATTCCTCGGCACCATCAATTAGTAATGGTACAAAAGGAAATATATACGAGGAAAGAAGAACCAGGAATGGACGAACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAAACCGGGAAAAAATGGATTGGATAGAAGACAAAGAGTCCCTGGTCCTCAGGCGCACAATGGAAATACACAGTATGGAAGTGGCAAGGATTTCAGGCGATCCAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAATCAATGAAAAGTCAGTCAACCTGA 1011 47.18 MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGSESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST* 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15049722 15050732 - CsaV3_4G025560.1 Csa04g01548 527158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01548 336 MobiDBLite consensus disorder prediction 290 304 - -
Csa04g01548 336 MobiDBLite consensus disorder prediction 200 219 - -
Csa04g01548 336 MobiDBLite consensus disorder prediction 252 282 - -
Csa04g01548 336 MobiDBLite consensus disorder prediction 220 251 - -
Csa04g01548 336 MobiDBLite consensus disorder prediction 195 336 - -
Csa04g01548 336 PANTHER OS02G0564300 PROTEIN 1 334 - -
Csa04g01548 336 PANTHER OS02G0564300 PROTEIN 1 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01548 Csa-Chr4:15049722 Csa05g00304 Csa-Chr5:1923939 2.47E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01548 - - csv:101220703 665.225