Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01555 ATGGAGGGAGGAGTTGAGGTGTTTGGATTTTGGCCAAGTCCGTTTAGTTTGAGAGTGGAATTGGCTCTCAAACTCAAAGGCATCCAATACCAATACGTTGAGGAAGATGTATTAAACCAAAAGAGCGATTTGTTGGTGAAATACAACCCAATTTACAAGAAGGTTCCTGTTCTTGTTCACCATGGAAAACCTATTTCAGAGTCTCTTGTAATTCTCGAATACATTGAAGAAACGTGGAAACACAGTCCCATCTTGCCCCAAGATTGCCATGAAAAAGCTCTTGCTAGGTTTTGGGCTGCCTATATCGATGGAAAGGTAGTGTCTGCTTTAGGAAAAGTTTGCGGAAGCAAAGGAGAAGTGATAGAGGAAGCAGTAGAAGAAGCAAAGGAGGCATTGGAACCACTTGAGAAAGAGCTTAAAAGCAACAAATTTTTTGGGGGAGAAAAAATTGGGTTTTTGGACATTGTGGGCATTCTCATAGCCTTTTGGATTCCTGCCAGTGAAGAAGCTTTAGGGATTGAAATGTTAACAGCCCATAAATTTCCAAACCTAATACAATGGATTGAAGAACTTGCCAATGACAATGTCGTGAAGGAGCTTATCCCTAAAAAGGATGACCTTGTTACCCATATGAAAACTGTTCTTGGAAAAAACTAG 657 40.49 MEGGVEVFGFWPSPFSLRVELALKLKGIQYQYVEEDVLNQKSDLLVKYNPIYKKVPVLVHHGKPISESLVILEYIEETWKHSPILPQDCHEKALARFWAAYIDGKVVSALGKVCGSKGEVIEEAVEEAKEALEPLEKELKSNKFFGGEKIGFLDIVGILIAFWIPASEEALGIEMLTAHKFPNLIQWIEELANDNVVKELIPKKDDLVTHMKTVLGKN* 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15091032 15093008 + CsaV3_4G025630.1 Csa04g01555 527165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01555 218 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Csa04g01555 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Csa04g01555 218 SFLD Main (cytGST) 2 214 - -
Csa04g01555 218 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Csa04g01555 218 Coils Coil 118 138 - -
Csa04g01555 218 Pfam Glutathione S-transferase, C-terminal domain 105 193 IPR004046 -
Csa04g01555 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Csa04g01555 218 Gene3D Glutaredoxin 1 84 - -
Csa04g01555 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Csa04g01555 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Csa04g01555 218 PANTHER GLUTATHIONE S-TRANSFERASE U8 1 214 - -
Csa04g01555 218 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Csa04g01555 218 Gene3D - 85 217 - -
Csa04g01555 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 214 IPR045073 -
Csa04g01555 218 CDD GST_N_Tau 5 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01555 Csa-Chr4:15091032 Csa04g01558 Csa-Chr4:15100702 2.41E-97 dispersed
Csa04g01555 Csa-Chr4:15091032 Csa04g01556 Csa-Chr4:15093556 3.52E-16 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01555 K00799 - csv:105434443 416.001