Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01558 | ATGGCCGGAGAAGATCAGGAAGTGCAGGTTTTTGGCTTCCGATCAGGTCCGTATAGTCTGAGAGTGGAATTGGCTCTCAAACTCAAAGGCGTCGTTTATGAACATATTGATGAAGATTTGGTGAACAAAAAGAGCGATTTGTTGGTGAAATACAACCCGATTTACAAGAAGGTTCCTGTTCTTGTTCATCATGGAAAACCCATTTCAGAGTCTCTTGTAATTCTTGAGTACATCGATGAAACTTGGACAGAAAATTATGCCATCTTGCCTCAAGATCCTTATCAAAGAGCTCTTGCCAGATTCTGGGCTAAGTATATTGATGATAAGGTTGTGCCTGCAGCACAAAAAGTTGCAAGAAGCCAAGAAGACGAAAGAGAGAAGAGTATAGAAGACGCACAAGCGACACTTGAACCACTTGAGAAAGAACTTGAAAACAAGTCGTTCTTTGGAGGAGACAAAATTGGATTTGTTGACATTGTAGGCCTAGTTTTAGCTCGTTGGGTTCCTGCCACTGAAGAAGCCGTAGGCTTTGAGCTTTTATCAGCCCACAAGTTTCCAAATCTAACTAAATGGAGTCAAAATTTTGTGAACCACAGTGTTGCAAAGGAAGTTCTGCCTAAAAAAGATGTTCTTGTTGCCTTTTTGAAGAATGTTGTGTTTAGTACAAAAAACTAG | 675 | 40.44 | MAGEDQEVQVFGFRSGPYSLRVELALKLKGVVYEHIDEDLVNKKSDLLVKYNPIYKKVPVLVHHGKPISESLVILEYIDETWTENYAILPQDPYQRALARFWAKYIDDKVVPAAQKVARSQEDEREKSIEDAQATLEPLEKELENKSFFGGDKIGFVDIVGLVLARWVPATEEAVGFELLSAHKFPNLTKWSQNFVNHSVAKEVLPKKDVLVAFLKNVVFSTKN* | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 15100702 | 15104888 | + | CsaV3_4G025660.1 | Csa04g01558 | 527168 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01558 | 224 | Pfam | Glutathione S-transferase, N-terminal domain | 8 | 80 | IPR004045 | - | |
Csa04g01558 | 224 | SUPERFAMILY | GST C-terminal domain-like | 80 | 217 | IPR036282 | - | |
Csa04g01558 | 224 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 92 | 220 | IPR010987 | - | |
Csa04g01558 | 224 | SFLD | Main.3: Omega- and Tau-like | 5 | 217 | IPR045073 | - | |
Csa04g01558 | 224 | SFLD | Glutathione Transferase (cytosolic) | 5 | 217 | IPR040079 | - | |
Csa04g01558 | 224 | Pfam | Glutathione S-transferase, C-terminal domain | 109 | 197 | IPR004046 | - | |
Csa04g01558 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE-RELATED | 1 | 220 | - | - | |
Csa04g01558 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 220 | IPR045073 | - | |
Csa04g01558 | 224 | Gene3D | Glutaredoxin | 1 | 88 | - | - | |
Csa04g01558 | 224 | SUPERFAMILY | Thioredoxin-like | 7 | 111 | IPR036249 | - | |
Csa04g01558 | 224 | CDD | GST_N_Tau | 8 | 82 | - | - | |
Csa04g01558 | 224 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 6 | 86 | IPR004045 | - | |
Csa04g01558 | 224 | Gene3D | - | 89 | 223 | - | - | |
Csa04g01558 | 224 | CDD | GST_C_Tau | 93 | 216 | IPR045074 | GO:0004364|GO:0006749 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g01555 | Csa-Chr4:15091032 | Csa04g01558 | Csa-Chr4:15100702 | 2.41E-97 | dispersed | |
Csa04g01558 | Csa-Chr4:15100702 | Csa04g01568 | Csa-Chr4:15155505 | 4.61E-96 | dispersed | |
Csa04g01557 | Csa-Chr4:15098037 | Csa04g01558 | Csa-Chr4:15100702 | 5.88E-123 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01558 | K00799 | - | csv:101215228 | 448.358 |