Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g01561 | ATGGCAGAACAAGTTCAAGTCTTGGGTTTTTGGGAAAGTGCTTTTAGTCGCAGAGTGGAGCTAGCTCTCAAACTCAAAGGCGTAGAATACCAATACTTTGAAGAAGATTTGCCCCATAACAAGAGTGATTTGCTTCTCAAATACAACCCTATTCACAAGAAGGTCCCTGTTCTGCTCCACCATGGTCGACCCATTGCTGAGTCTCTTGTGATTCTGGAATACATTGATGATATCTGGAAAGAAAATTATCCCATCTTGCCCCAACATCCCCACCAAAGAGCTCTTGCCAGATTCTGGGCTAAGTATATCGATGACAAGGTCGTGGGTGCAGTAGTGAAGGCTGCTGGAAGCAGAGGAGAAGATAGAGAGAAGGCTATAGAAGAGGCAAGGGAAGCATTAGAAGCACTTGAGAAAGAGATTGAAAAAAACAATGAACTGTTTGGAGGAGATGATATTGGGTTTGTGGACATTGTTGGGACTGTGATTGCTGGTTGGGTTCCTGCCATTGAAGAATGTTTTGAGTTTCAGCTGCTTACAACTGATAACTTCCCTAACTTGATCAAATGGAGTGATCAGCTTGTTCAGCATTCCATTGTCAACCAGATTCTCCCTCCTAAAAATGAGATTGTTGCCTTTATGAAAGCTAATTGGAAATTTTGA | 660 | 42.42 | MAEQVQVLGFWESAFSRRVELALKLKGVEYQYFEEDLPHNKSDLLLKYNPIHKKVPVLLHHGRPIAESLVILEYIDDIWKENYPILPQHPHQRALARFWAKYIDDKVVGAVVKAAGSRGEDREKAIEEAREALEALEKEIEKNNELFGGDDIGFVDIVGTVIAGWVPAIEECFEFQLLTTDNFPNLIKWSDQLVQHSIVNQILPPKNEIVAFMKANWKF* | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 15113056 | 15113853 | + | CsaV3_4G025690.1 | Csa04g01561 | 527171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g01561 | 219 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
Csa04g01561 | 219 | SUPERFAMILY | Thioredoxin-like | 5 | 107 | IPR036249 | - | |
Csa04g01561 | 219 | SUPERFAMILY | GST C-terminal domain-like | 77 | 217 | IPR036282 | - | |
Csa04g01561 | 219 | Gene3D | - | 86 | 219 | - | - | |
Csa04g01561 | 219 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 83 | IPR004045 | - | |
Csa04g01561 | 219 | Pfam | Glutathione S-transferase, C-terminal domain | 109 | 194 | IPR004046 | - | |
Csa04g01561 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 1 | 215 | IPR045073 | - | |
Csa04g01561 | 219 | CDD | GST_C_Tau | 90 | 215 | IPR045074 | GO:0004364|GO:0006749 | |
Csa04g01561 | 219 | SFLD | Main (cytGST) | 2 | 215 | - | - | |
Csa04g01561 | 219 | Coils | Coil | 119 | 146 | - | - | |
Csa04g01561 | 219 | SFLD | Main.3: Omega- and Tau-like | 2 | 215 | IPR045073 | - | |
Csa04g01561 | 219 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 213 | IPR010987 | - | |
Csa04g01561 | 219 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Csa04g01561 | 219 | CDD | GST_N_Tau | 5 | 79 | - | - | |
Csa04g01561 | 219 | PANTHER | GLUTATHIONE S-TRANSFERASE U8 | 1 | 215 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g01561 | Csa-Chr4:15113056 | Csa04g01568 | Csa-Chr4:15155505 | 1.83E-149 | dispersed | |
Csa04g01560 | Csa-Chr4:15111249 | Csa04g01561 | Csa-Chr4:15113056 | 2.57E-93 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g01561 | K00799 | - | csv:105435246 | 390.578 |