Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01567 ATGGGAGAAAAAGTGGAGGTATTTGGGGCATGGTTCAGCCCTTTCAGCCGTCGTGTAGAATTGGCTTTGAAATTGAAAGGGATTCAATATGATTACATTGAAGAAGAAATATACAAGAAGAAGAGTGATTTGATCCTCAAATTCAACCCTGTTTACAAGAAGGTTCCTGTGTTTGTCCATGGGGGAAAACCCATAGCAGAGTCCATTGTTATTCTTCAATACATAGATGAGAGTTGGAAGGACAATCCCATTTTGCCTCAACATCCTTATCACAAAGCTCTTGCTCTCTTTTGGGCCAAGTTTTTGGATGACAAGGTGCTACCTTCATTAATGAAAGCAAGGAGATCAGGTGAAGGAAAGGATAGAGAAGAGGCAATAGGTGAGGCAAGGGAAGGGTTAAGAGCACTTGAAGAAGAGCTTAAAGGGAAGAAATTCTTTGGAGGAGAGAAATTGGGATTTGTTGACATTGTTGCTAATTTCATAGCATATTGGAGTCAAGCCATGGATGAAGCTTTTGGTGTTCAAATACTTACCAGTGAATTGCAAAACCTTCCAAGGCTAACTCAATGGTGTCATCACTTTCTTCAACACCCCATTGTCAAACACAATCTCCCCCCCAAAACTCAACTTCTTGCCCTTTTTAAGTCTCAATTTGTGGACACAAATTAA 669 40.36 MGEKVEVFGAWFSPFSRRVELALKLKGIQYDYIEEEIYKKKSDLILKFNPVYKKVPVFVHGGKPIAESIVILQYIDESWKDNPILPQHPYHKALALFWAKFLDDKVLPSLMKARRSGEGKDREEAIGEAREGLRALEEELKGKKFFGGEKLGFVDIVANFIAYWSQAMDEAFGVQILTSELQNLPRLTQWCHHFLQHPIVKHNLPPKTQLLALFKSQFVDTN* 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15153192 15154275 - CsaV3_4G025750.1 Csa04g01567 527177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01567 222 Gene3D Glutaredoxin 1 84 - -
Csa04g01567 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 218 IPR045073 -
Csa04g01567 222 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Csa04g01567 222 Gene3D - 85 221 - -
Csa04g01567 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Csa04g01567 222 SFLD Main (cytGST) 2 216 - -
Csa04g01567 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Csa04g01567 222 CDD GST_C_Tau 89 215 IPR045074 GO:0004364|GO:0006749
Csa04g01567 222 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Csa04g01567 222 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Csa04g01567 222 Pfam Glutathione S-transferase, C-terminal domain 107 198 IPR004046 -
Csa04g01567 222 CDD GST_N_Tau 5 79 - -
Csa04g01567 222 PANTHER GLUTATHIONE S-TRANSFERASE U8 1 218 - -
Csa04g01567 222 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00999 Csa-Chr3:8073072 Csa04g01567 Csa-Chr4:15153192 1.44E-35 dispersed
Csa03g01146 Csa-Chr3:8982297 Csa04g01567 Csa-Chr4:15153192 3.74E-60 dispersed
Csa04g01556 Csa-Chr4:15093556 Csa04g01567 Csa-Chr4:15153192 6.34E-08 dispersed
Csa04g01567 Csa-Chr4:15153192 Csa04g01569 Csa-Chr4:15158782 2.72E-82 dispersed
Csa04g01567 Csa-Chr4:15153192 Csa04g01568 Csa-Chr4:15155505 1.59E-83 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01567 K00799 - csv:101214027 423.32