Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01568 ATGGCAGAACAAGTACAAGTCTTGGGTTTTTGGGGAAGTCCTTTTAGTCGCAGAGTGGAGCTAGCTCTCAAGCTCAAAGGCGTAGAATACCAATACTTTGAAGAAGATTTGTTTCATAACAAGAGTGATTTGCTTCTCAAATACAACCCTATTCACAAGAAGGTCCCTGTTCTGCTCCACCACGGTCAACCCATTGCTGAGTCTCTTGTGATTCTGGAATACATTGATGATATCTGGAAAGAAAATTATCCCATCTTGCCCCAACATCCCCACCAAAGAGCTCTTGCCAGATTCTGGGCTAAGTTTATTGACGACAAGGTCGTGGGTGCAGTAGTGAAGGCTGCTGGAAGCAGAGGAGAAGATAGAGAGAAGGCTATAGAAGAGGCAAGGGAAGCATTAGAAGCACTTGAGAAAGAGATTGAAAAAAACAATGAACTGTTTGGAGGAAATGATATTGGGTTTGTAGACATTGTTGGGACTGTGATTGCTGGTTGGATTCCTGCCTTTGAAGAATGTTTTGGGTTTCAGCTGCTTACAGCTGATAACTTCCCTAACCTAATCAAATGGAGTGATCAGCTTGTTAACCATTCCATTTTCAACCAGATTCTCCCTCCAAAATATGAGATTGTTGCCTGCATGAAAGCTAATTGGAAAATTTGA 660 42.12 MAEQVQVLGFWGSPFSRRVELALKLKGVEYQYFEEDLFHNKSDLLLKYNPIHKKVPVLLHHGQPIAESLVILEYIDDIWKENYPILPQHPHQRALARFWAKFIDDKVVGAVVKAAGSRGEDREKAIEEAREALEALEKEIEKNNELFGGNDIGFVDIVGTVIAGWIPAFEECFGFQLLTADNFPNLIKWSDQLVNHSIFNQILPPKYEIVACMKANWKI* 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15155505 15156403 - CsaV3_4G025760.1 Csa04g01568 527178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01568 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
Csa04g01568 219 Gene3D - 86 218 - -
Csa04g01568 219 Pfam Glutathione S-transferase, C-terminal domain 108 195 IPR004046 -
Csa04g01568 219 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Csa04g01568 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Csa04g01568 219 PANTHER GLUTATHIONE S-TRANSFERASE U8 1 215 - -
Csa04g01568 219 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Csa04g01568 219 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Csa04g01568 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Csa04g01568 219 Coils Coil 119 146 - -
Csa04g01568 219 Gene3D Glutaredoxin 1 85 - -
Csa04g01568 219 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Csa04g01568 219 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Csa04g01568 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Csa04g01568 219 CDD GST_N_Tau 5 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00544 Csa-Chr1:3551371 Csa04g01568 Csa-Chr4:15155505 1.65E-55 dispersed
Csa04g01558 Csa-Chr4:15100702 Csa04g01568 Csa-Chr4:15155505 4.61E-96 dispersed
Csa04g01561 Csa-Chr4:15113056 Csa04g01568 Csa-Chr4:15155505 1.83E-149 dispersed
Csa04g01567 Csa-Chr4:15153192 Csa04g01568 Csa-Chr4:15155505 1.59E-83 tandem
Csa04g01568 Csa-Chr4:15155505 Csa04g01569 Csa-Chr4:15158782 2.77E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01568 K00799 - csv:101213782 404.831