Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g01774 ATGCAGTTATATCATCATCCTTACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAGAGCATTGATTACACGTCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCTAAACTTCCCGTATTTCAAAATGGTTCCCACATTATTTTCGACACAATTGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGACCGACGAGATAATGCCAAGTAGCAGGGAAGTTGTTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATATTTCACTCTTGCCCATATCCCTGAAAAGTACCGTCTTACTGTCACCAGATTTATAAGGCGAGTGGTGATCTCTCGGATGGCAGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTCAGAGAAGCATACGAGACTGAAGACAAATTGAAAAACAAATCTGTTGTCAAACAAAGCACTGATCATCTAGTTGCACTTCTCGATGAAATCGAATTGAAACTAAGCGAGACTTCTTACATAGCAGGGGAAGAGTTCACCATGGCTGATGCCGTATTCATTCCAGTGCTGGCTCGACTCGAGCTGTTGAAGCTGGCAGATGAGTATATAGGCAGCAGACCAAACATTTCAGAGTATTGGATATTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGAAAGTATTTCAAGGGATGGAGAAAGCATAAAACACTTCTGAAAACTTGGTGCTTTGTTCATATCAGAACCTTGCTGAGAAGATATTGA 804 42.29 MQLYHHPYSLDSQKVRLALEEQSIDYTSYHVNPITAKNMDSSFFKINPSAKLPVFQNGSHIIFDTIEIIQYIERIAVVSSGTDEIMPSSREVVEWMHKIQEWNPKYFTLAHIPEKYRLTVTRFIRRVVISRMAETPEMAAAYHRKLREAYETEDKLKNKSVVKQSTDHLVALLDEIELKLSETSYIAGEEFTMADAVFIPVLARLELLKLADEYIGSRPNISEYWILVQQRPSYKKVIGKYFKGWRKHKTLLKTWCFVHIRTLLRRY* 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17398529 17402133 + CsaV3_4G028000.1 Csa04g01774 527384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g01774 267 Pfam Glutathione S-transferase, C-terminal domain 162 209 - -
Csa04g01774 267 Gene3D Glutaredoxin 1 75 - -
Csa04g01774 267 CDD GST_N_family 1 73 - -
Csa04g01774 267 SFLD Main (cytGST) 1 231 - -
Csa04g01774 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Csa04g01774 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Csa04g01774 267 SUPERFAMILY GST C-terminal domain-like 137 242 IPR036282 -
Csa04g01774 267 Gene3D - 127 238 - -
Csa04g01774 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 251 IPR010987 -
Csa04g01774 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Csa04g01774 267 CDD GST_C_family 147 225 - -
Csa04g01774 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Csa04g01774 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01774 Csa-Chr4:17398529 Csa07g01817 Csa-Chr7:18391662 2.37E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g01774 K22077 - csv:101222476 537.339