Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa04g01786 | ATGTCGAAGTCCCCTGCCACAGAAAAAATTGAGTCTCTGTCACCTTCTACTTCTAGCCCTCGGGAAAATAATGGAGCAGCAATTATGGATGATCCAGAAACTACAATGGCTACTGTTGCTCAGCTTATTGAGCAACTTCATGCAAGTATGTCTTCGTCACAAGAGAAAGAACTTATTACAGCACGCCTACTGGGAATTGCTAAAACACAAAAGGATGCTAGAACACTTATTGGCTCCCATTCTCAAGCTATGCCTTTGTTTATCAACGTTCTCAGAACTGGGTCTGCGGTCGCAAAAGTTAATGTTGCAAGAACTCTAAGTGTTTTATGCAAAGATGACGAACTGCGGTTGAAAGTGCTTCTTGGTGGGTGCATCCCACCATTGCTCTCACTCTTGAAATCTGAATCAATTGAGGCTAGCAAGGCTGCAGCTGAGGCAATCTATGAAGTTTCTTCAAGCGGTCTTTTGAATGATCGTGTTGGTATGAAGATATTTGTCACAGAAGGTGTGATACCCACCTTATGGAACCAACTAAATCCAAACAATAGGCAGGACAAAGTTGTAGAGGGATTCGTTACTGGATCTTTGAGAAATCTTTGTGGAGACAAGGATGGTTACTGGAAAGCCACACTTGAGGCTGGGGGAGTGGATATCATTGTTGATCTTCTTTCTTCTGACAGTGCAACTGTTCAGTCAAATGCAGCTTCTCTTCTAGCACGCCTAATGTTGGCCTTCAGTGATAGCATAGCTAAGGTTATAGAATCTGGAGCTGTGAAAGCTTTGCTTGGGCTTGTAAGTAAGAAAAATGATATTTCTGTTCGTGCAAGTGCTGCTGACGCTCTGGAGGCTCTCTCATCAAAGTCAACTGGGGCCAAAAAAGCAATTGTGGACGAGGAAGGTATTCCCGTACTTATCAGGGCAGTAGTTGCCCCTTCTAAAGAGTGTATGCAGGGTAAACATGGCCAGTCTCTACAGGAGCATGCAACACGAGCACTGGCCAATCTTTGTGGTGGGATGTCTGCACTAATACTTTATCTAGGGGAACTTTCACAATCCCCTCGTCATTATGCACCGGTTGCTGATATAGTTGGAGCACTTGCATACACTCTAATGGTTTTTGAGAAGTCCATTGATGAGGACCCATTTAATGCTACCAAAATAGAAGATATTCTTGTAACACTTCTAAAGCCTCACGATAATAAGTTGGTTCAGGAGCGTGTCCTCGAAGCAATGGCTAGTCTATATGGTAATGTATATTTCTCAGAATGTTTAAACCATGCAGAAGCAAAAAAGGTGCTTATTGGACTTGTTACTACTGCTGCTACTGATGTGCAAGAGTACCTAATTCCATCTTTGACTAGTTTATGTTGCAATGGGGTTGGCATCTGGGAAGCCATTGGCAAGAGAGAAGGAGTTCAGTTACTTATATCATTACTGGGGTTATCAAGTGAGCAACATCAGGAGTATGCTGTTCAGTTGCTGGAAATCTTGACTGACCAGGTAGATGACAGCAAGTGGGCTATCACTGCTGCGGGTGGAATTCCTCCATTGGTTCAGTTATTAGAGACTGGTTCCCACAAGGCAAGGGAGGATGCAGCACATATTTTGTGGAATTTGTGCTGTCACAGTGAAGACATTCGAGCTTGTGTTGAAAGTGCAGGTGCCATCCCGGCATTTTTATGGCTTTTAAAAAGTGGTGGATCAAGGGGCCAGGAAGCGTCTGCTATGGCACTTTCAAAACTTGTTCAAACTGCTGATTCTGCTACTATAAACCAGCTATTAGCCATGCTCTTAGGAGATTCTCCAAAAGAAAAAGCTAACATAATTCAAGTTCTAGGTCACGTGCTTACTATGGCGTCATATGAAGATTTTGTGCATAGAGATTCTGCAGCTAATAAGGGTCTGAGAACTCTTGTTCAAGTTCTCAACTCATCAAATGAAGAAACGCAAGCCCATGCTGCTTCTGTTCTAGCAGACTTATTTAGCTCAAGGCCAGATATTTCTGATAGTCTTGCAACTGATGAGATTGTGCATCCTTGTATGAAGCTCTTGGCTAGCAATACTCAAGTTGCCACTCAATCTGCTCGAGCATTGGCTGCTCTCTCCCGACCCAGCAAGACAAAAGCAATGAATAAGATGCGCCATATTGCTGAAGGGGATGTCAAGCCCCTGATTAAGTTGGCTAAAACGTCTTCTGTTGATGCTGCTGAAACTGCAGTTGCTGCCCTGGCCAATCTTCTATCTGATTCTCAAATAGCTGCAGAAGCTCTAGCAGAAGATGTTGTCTCAGCTCTAACTAGAGTTTTGGGAGAAGGAACTCCAGTTGGTAAGAAGAGTGCAGCTCAAGCCCTTCATCAATTGTTGAACCATTTTCAACCTGGTGAAGTGTTTGCAAGTGAAGCTCAGTGTCGTTTCATTGTCCTTGCTCTAGTTGACTCCTTAAGGTCTATGGATTTGGATGGGAACAATGTTGTAGATGCTTTAGAAGTAATTTCACTCTTATTTATCACCAAGGTAGGAGCTAGCTTGACTTATGCACCATGGTCTGCCCTGGCTGAAGATCCTTCAAGCTTGGAACCACTTGTGTACTGTCTTGCTGAGGGACCATCTCCACTCCAGGACAGGGTCATTGAAATTTTGTCAAGACTATGTGGAGACCAACCTGTTGTTTTAGGTGATTTGTTAGTTGCAAGATCAAAATCACTTGATTCTCTTGCTAGTAAAATAATAAAATCTTCAAATCCAGAGGTAAAGTCAGGAGGGGCTGCATTACTCATCTGTGCTATGAAGGAGCACAAACAGCAGTCAGTGGGAGCGCTAGACTCATTTGGATGTCTTAAACTACTCATACATGCTTTAGTGGGTTTGATAAAACAAAATTCTACTTATTCCTCTCCAGATATTGAAGTTAGGACCCATAGAGGTTTTATTAAACGAAGTACTTTTCTAGACGGAGATAGGTTTGATGCTTCTGACTCAGCCACAGTCATGGGAGGTACCATTGCCCTCTGGTTGTTGTCAATAATTGCTTCTTTTAATGTGGAGAACAAGGTTGCTGTTCTGCAAGCTGGAGGACTTGAGGCCCTGTCTGACAAGCTTGTTAGCTATACTACAAATTCACAGGCAAAATTGGAGGATGTGGATGGTATATGGATCAGTGCCCTGCTCCTAGCAATTTTGTTCCAAGATGCAAGTGTTGCCTCATCCCCTGCAACAATGAGTATTATTCCTTCACTTGCTTTTCTGGCAAGATCCGAGGAGGTGAATGATAAATTCTTTGCTGCACAGGCAATAGCAAGTCTTGTTTGTAATGGTAGCAAAGGAGTAAATCTTGCCATTGCAAATTCTGGTGCAATTGTTGGGTTAATTACACTAATTGGGTTTTTGGAGTCAGATATGCCAAACCTTGTTTCTTTGGCAGATGAGTTTTCTTTGACACAGAAACCAGATCAAGTTGTTCTTGAGCATCTATTTGAGATTGAAGAAATCAGAATTGGGTCAACTGCACGCAAAACTATACCTCTTCTAGTTGATCTTTTGAGACCATTACCAGATAGACCTGGTGCTCCTCCTGTTGCTGTAAAGCTCTTGACCCGTATTGCCGATGGAAATGATGCAAATAAATTAATGATGGCTGAGGCTGGAGCTGTGGATGCTTTGACAAAGTACCTCTCTTTGAGTCCGCAAGACTCAACAGAGGCCATAATATCTGATCTCCTGAGAATTTTATTTAGCAATCCTGATCTTATTCGTTATGAGGCATCGGCCAGTTCCTTGAATCAACTTATAGCCGTGCTGCGTCTAGGATCAAGAAGTGCAAGATTCAGTGCTGCAAGGGCTCTTTTTGAACTTTTTGATTGTGAGTACATTAGGGACTCTGAGCTAGCCAAGCAGGCTTTTTATCCATTAGTTGACATGCTCAATGCCACATCAGAAAGTGAACAAGGTGCCGCCCTTTCTGCATTAATTAGATTGACTTCAGGATATTCTTCAAAAACGGATCTACTGAATGACGTGGAAGGAACCCCTCTTGACAGTTTATGCAAAATTTTAATAACTTCGTCATCCTTGGAGCTAAAGACAAATGCTGCAGAACTATGTTTTGTGCTGTTTGGTAATATTAAGGTAAGAACAAATCCAATTGTCTCTGAATGCATACAGCCACTCATATTTCTGATGCAGTCAGATTCAAGTGCAGCAGTAGAGTCTGGGGTATGTGCACTTGAAAGATTGTTGGATGATGAACAACAAGTAGAGCTTACTTTACCCTATGACATTGTGAACCTCCTTGTTAGTTTGGTCTCTGGAACTAATTATAGATTGATTGAAGCTAGCATCTGCTCTCTCATAAAGTTGGGAAAAGATCGGACTCAACTCAAAATGGATATGGTTAAGGTTGGGGTCATTGACAATTGCCTCGAGTTACTGCCAGATGCTCCTAGTTCGTTATGCTCCTCAGTGGCGGAACTATTTCGCATTTTAACAAATAGTAATGCAATTGCCAGGAGTTCAGATGCTGCAAAAATAGTGGAACCTCTTTTTTTGGTTTTGCTTCGTCCAGATTTTAATTTGTGGGGGCAGCACAGTGCCTTGCAAGCCCTTGTAAATATTTTGGAGAAACCGCAAAGTCTTTTGACTCTAAATCTTACCCCTAGCCAGGTTATTGAGCCTCTGATTTCATTTCTTGAGTCCCCATCCCGAGCTGTCCAGCAGCTCGGCACAGAGTTATTATCTCATCTTCTTGCACAAGAACATTTTCAGCAAGATATTACAACTAAGAATGCAGTTGTGCCACTTGTTCAACTTGCTGGGATTGGAATATTGAATCTACAGCAAACAGCTATAAGGGCATTGGAAAAAATTTCCACTAGCTGGCCTAAGTCTGTTGCTGATGCTGGAGGTATCTTTGAGCTTTCTAAGGTTATTATACAAGAGGACCCTCAGCCTCCTCACACTCTGTGGGAATCAGCCGCCATGATTTTGTCTAATGTTTTGCGATTCAATGCTAAGTATTATTTTAAAGTTCCTGTGGTTGTTCTTGTGAAAATGTTGCATTCAACTGTGGAGAGCACTATCACGGTGGCTCTCAGTGCTTTAGTTAATCATGAAGGTAATGATACATCAAGTGCCGAGCAAATGGCAGAAGCTGGTGCTATAGATGCATTGGTGGACCTTCTAAGATCTCATCAGTGTGAAGAAGCGTCTGGAAGGTTACTTGAAACTTTATTTAATAATGTCAGAGTGCGAGAGATGAAGGTTTCCAAGTATGCAATAGCACCCTTATCACAGTATTTATTAGATCCACAGACTAGATCCCAGCCCGGTAAGCTTCTTGCAACTTTAGCACTGGGAGATCTGTCACAGCATGCGGGACATGCAAGAGCTAGCGACTCTGTATCTGCTTGTCGTGCATTGATAAGCTTGCTTGAAGATGAGGCAACAGAAGAAATGAAAATGGTGGCTATTTGTGCTCTGCAAAACTTTGTCATGCACAGCAGAACAAATAGGCGAGCAGTTGCTGAAGCGGGTGGAATACTGGTTGTTCAGGAGCTTCTCTTGTCTCCAAGTCCAGAAATTTCTGGTCAGGCAGCATTGCTGATAAAATTCTTGTTTTCTAATCACACATTACAAGAATATGTGTCAAATGAGCTCATCAGATCTTTGACAGCTGCACTAGAGAGGGAATTGTGGTCTACCGCAACCATCAATGAAGAGGTTTTAAGAACCTTGAATGTCATATTCACCAACTTTCCCAAACTCCATGTTTCTGAAGCAGCTACTCTTTCCATACCTCATCTGATTGGAGCTCTAAAATCTGGTAATGAGGCAGCACAAGAAACTGTTTTGGATACCTTATGTTTGCTAAAGCATTCGTGGTCATCCATGCCAATAGACATTGCAAAGTCTCAAGCTATGATTGCAGCTGAGGCCATTCCTATACTGCAAATGCTGATGAAAACTTGCCCTCCTAGTTTTCATGACAGAGCAGATAGCCTTTTACATTGCTTACCAGGTTGTCTGACTGTTATTATTAAGCGTGGAAACAACTTGAAACAGACGATGGGAAGTACAAATGCTTTCTGTCGATTGTCTATCGGGAACGGCCCTCCTCGACAAACAAAGGTTGTTAGCCACAGTACATCTCCAGAATGGAAAGAAGGATTTACTTGGGCATTTGATGTGCCTCCAAAGGGGCAAAAGCTGCACATCATCTGCAAAAGCAAAAGCACTTTTGGGAAGTCTACTCTCGGAAGAGTGACCATCCAGATCGACAAAGTTGTAACGGAAGGATTGTACAGTGGATTATTCAGCTTAAATCACGATGGAGACAAAGATGGCTCTTCACGAACACTCGAAATCGAAATTATATGGTCAAACAGAATATCAGATGAAGAACTGTGA | 6402 | 42.42 | MSKSPATEKIESLSPSTSSPRENNGAAIMDDPETTMATVAQLIEQLHASMSSSQEKELITARLLGIAKTQKDARTLIGSHSQAMPLFINVLRTGSAVAKVNVARTLSVLCKDDELRLKVLLGGCIPPLLSLLKSESIEASKAAAEAIYEVSSSGLLNDRVGMKIFVTEGVIPTLWNQLNPNNRQDKVVEGFVTGSLRNLCGDKDGYWKATLEAGGVDIIVDLLSSDSATVQSNAASLLARLMLAFSDSIAKVIESGAVKALLGLVSKKNDISVRASAADALEALSSKSTGAKKAIVDEEGIPVLIRAVVAPSKECMQGKHGQSLQEHATRALANLCGGMSALILYLGELSQSPRHYAPVADIVGALAYTLMVFEKSIDEDPFNATKIEDILVTLLKPHDNKLVQERVLEAMASLYGNVYFSECLNHAEAKKVLIGLVTTAATDVQEYLIPSLTSLCCNGVGIWEAIGKREGVQLLISLLGLSSEQHQEYAVQLLEILTDQVDDSKWAITAAGGIPPLVQLLETGSHKAREDAAHILWNLCCHSEDIRACVESAGAIPAFLWLLKSGGSRGQEASAMALSKLVQTADSATINQLLAMLLGDSPKEKANIIQVLGHVLTMASYEDFVHRDSAANKGLRTLVQVLNSSNEETQAHAASVLADLFSSRPDISDSLATDEIVHPCMKLLASNTQVATQSARALAALSRPSKTKAMNKMRHIAEGDVKPLIKLAKTSSVDAAETAVAALANLLSDSQIAAEALAEDVVSALTRVLGEGTPVGKKSAAQALHQLLNHFQPGEVFASEAQCRFIVLALVDSLRSMDLDGNNVVDALEVISLLFITKVGASLTYAPWSALAEDPSSLEPLVYCLAEGPSPLQDRVIEILSRLCGDQPVVLGDLLVARSKSLDSLASKIIKSSNPEVKSGGAALLICAMKEHKQQSVGALDSFGCLKLLIHALVGLIKQNSTYSSPDIEVRTHRGFIKRSTFLDGDRFDASDSATVMGGTIALWLLSIIASFNVENKVAVLQAGGLEALSDKLVSYTTNSQAKLEDVDGIWISALLLAILFQDASVASSPATMSIIPSLAFLARSEEVNDKFFAAQAIASLVCNGSKGVNLAIANSGAIVGLITLIGFLESDMPNLVSLADEFSLTQKPDQVVLEHLFEIEEIRIGSTARKTIPLLVDLLRPLPDRPGAPPVAVKLLTRIADGNDANKLMMAEAGAVDALTKYLSLSPQDSTEAIISDLLRILFSNPDLIRYEASASSLNQLIAVLRLGSRSARFSAARALFELFDCEYIRDSELAKQAFYPLVDMLNATSESEQGAALSALIRLTSGYSSKTDLLNDVEGTPLDSLCKILITSSSLELKTNAAELCFVLFGNIKVRTNPIVSECIQPLIFLMQSDSSAAVESGVCALERLLDDEQQVELTLPYDIVNLLVSLVSGTNYRLIEASICSLIKLGKDRTQLKMDMVKVGVIDNCLELLPDAPSSLCSSVAELFRILTNSNAIARSSDAAKIVEPLFLVLLRPDFNLWGQHSALQALVNILEKPQSLLTLNLTPSQVIEPLISFLESPSRAVQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLAGIGILNLQQTAIRALEKISTSWPKSVADAGGIFELSKVIIQEDPQPPHTLWESAAMILSNVLRFNAKYYFKVPVVVLVKMLHSTVESTITVALSALVNHEGNDTSSAEQMAEAGAIDALVDLLRSHQCEEASGRLLETLFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQPGKLLATLALGDLSQHAGHARASDSVSACRALISLLEDEATEEMKMVAICALQNFVMHSRTNRRAVAEAGGILVVQELLLSPSPEISGQAALLIKFLFSNHTLQEYVSNELIRSLTAALERELWSTATINEEVLRTLNVIFTNFPKLHVSEAATLSIPHLIGALKSGNEAAQETVLDTLCLLKHSWSSMPIDIAKSQAMIAAEAIPILQMLMKTCPPSFHDRADSLLHCLPGCLTVIIKRGNNLKQTMGSTNAFCRLSIGNGPPRQTKVVSHSTSPEWKEGFTWAFDVPPKGQKLHIICKSKSTFGKSTLGRVTIQIDKVVTEGLYSGLFSLNHDGDKDGSSRTLEIEIIWSNRISDEEL* | 2134 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 17512154 | 17521703 | + | CsaV3_4G028120.1 | Csa04g01786 | 527396 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa04g01786 | 2133 | SUPERFAMILY | ARM repeat | 33 | 919 | IPR016024 | - | |
| Csa04g01786 | 2133 | Gene3D | - | 1000 | 1158 | IPR011989 | - | |
| Csa04g01786 | 2133 | Pfam | C2 domain | 2006 | 2104 | IPR000008 | - | |
| Csa04g01786 | 2133 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Csa04g01786 | 2133 | ProSitePatterns | EF-hand calcium-binding domain. | 818 | 830 | IPR018247 | - | |
| Csa04g01786 | 2133 | Gene3D | C2 domain | 2005 | 2132 | IPR035892 | - | |
| Csa04g01786 | 2133 | ProSiteProfiles | C2 domain profile. | 1986 | 2103 | IPR000008 | - | |
| Csa04g01786 | 2133 | Gene3D | - | 1344 | 1586 | IPR011989 | - | |
| Csa04g01786 | 2133 | Gene3D | - | 1587 | 1795 | IPR011989 | - | |
| Csa04g01786 | 2133 | SMART | arm_5 | 621 | 662 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 1832 | 1872 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 1706 | 1747 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 1013 | 1062 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 664 | 703 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 708 | 748 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 1204 | 1245 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 112 | 152 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 202 | 243 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 457 | 499 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 1582 | 1623 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 501 | 541 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 749 | 789 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 543 | 583 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 288 | 337 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 1456 | 1496 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 245 | 286 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SMART | arm_5 | 69 | 111 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | Gene3D | - | 21 | 192 | IPR011989 | - | |
| Csa04g01786 | 2133 | PANTHER | PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 | 12 | 2132 | IPR044297 | GO:0008017|GO:0010330|GO:0051211|GO:2001006 | |
| Csa04g01786 | 2133 | Gene3D | - | 711 | 977 | IPR011989 | - | |
| Csa04g01786 | 2133 | SUPERFAMILY | ARM repeat | 1169 | 1539 | IPR016024 | - | |
| Csa04g01786 | 2133 | PANTHER | - | 12 | 2132 | - | - | |
| Csa04g01786 | 2133 | Pfam | Armadillo/beta-catenin-like repeat | 209 | 241 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | Pfam | Armadillo/beta-catenin-like repeat | 505 | 540 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SUPERFAMILY | ARM repeat | 1585 | 2003 | IPR016024 | - | |
| Csa04g01786 | 2133 | Gene3D | - | 1159 | 1343 | IPR011989 | - | |
| Csa04g01786 | 2133 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Csa04g01786 | 2133 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2004 | 2109 | IPR035892 | - | |
| Csa04g01786 | 2133 | CDD | C2 | 2007 | 2097 | - | - | |
| Csa04g01786 | 2133 | Gene3D | - | 370 | 710 | IPR011989 | - | |
| Csa04g01786 | 2133 | SMART | C2_3c | 2006 | 2102 | IPR000008 | - | |
| Csa04g01786 | 2133 | Gene3D | - | 1796 | 2003 | IPR011989 | - | |
| Csa04g01786 | 2133 | Gene3D | - | 193 | 369 | IPR011989 | - | |
| Csa04g01786 | 2133 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 512 | 554 | IPR000225 | GO:0005515 | |
| Csa04g01786 | 2133 | SUPERFAMILY | ARM repeat | 853 | 1116 | IPR016024 | - | |
| Csa04g01786 | 2133 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 256 | 300 | IPR000225 | GO:0005515 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa04g01786 | - | - | - | csv:101220047 | 4006.83 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Csa04g01786 | Csa-Chr4:17512154 | Csa06g03185 | Csa-Chr6:27062677 | 0 | dispersed | |
| Csa04g01786 | Csa-Chr4:17512154 | Csa01g02400 | Csa-Chr1:21307088 | 1.47E-07 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi18g243 | . | . | . | . | Bpe02g00638 | . | . | Bma01g02075 | . | . | Cma01g01381 | Cma09g00780 | . | . | . | Cpe06g00615 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi04g02405 | Csa04g01786 | . | . | . | . | . | . | . | . | . | . | Sed05g2372 | Cmo01g01431 | Cmo09g00772 | . | . | . | Car09g00689 | . | Cpe02g00558 | Bhi09g02699 | Tan01g4048 | Cmetu09g1153 | . | . | Mch11g0844 | . | Cla11g01545 | Cam11g1609 | Cec11g1637 | Cco11g1639 | Clacu11g1767 | Cmu11g1583 | Cre11g2000 | . | . | Chy07g00624 | Cme07g00829 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0010101 | 0 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 31 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Csa04g01786 | Csa_Chr04 | FPKM | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |