Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02214 ATGCCAATGCCAATGCCCCATTTCAACCCTCCTTCTCTTCTTTCTCTCTTCTTCTTATTATTTCTTCTTCTCATTCCTTCCGTCCTCGCTGCACCCGATTGCCAGTGTCCCGAGGATTCCGAAGATGACGGTAAACGAGATGAAACTTTAGCTCTCAAATACAAGGTCGTTGCCATAGCTACCATTCTTGTCGCTGGAATTATTGGAGTGGTGATTCCTTTGTTAGGGAAGCTGATTCCGGCCTTAAGTCCGGAGAAGGATATTTTCTTTATCATTAAAGCTTTTGCTGCTGGAGTTATATTAGCTACTGGATTTATTCATGTTCTTCCCGATGCTTATGGGAATCTTACCTCCTCCAAATTGAACGAGCATCCGTGGGGGAAGTTTCCGTTCACTGGTTTAGTGGCTATGGTTGCGGCTATTGGTACTTTGATGGTGGATGCGGGTGCGAGTTCTTATTATACTCGGATTCATCTTAATAAAGCTCAGCCGGAGTTGAATGGTGATGATGAGATGCGCGGCGGCGGCTGTGGCGCTCATGATGGTCATGTTCATGTTCATACTCATGGCACTCATGGTCATGCTCATGGCTCAGCCGATGTGGGTGGCTCATCGACGGAGATTCTCCGCCATCGTGTCATTTCTCAGGTATTGGAGCTTGGGATAGTGGTACATTCGGTAATTATAGGAATAGGTTTGGGTGTCTCTGAATCTCCAGAAACAATAAGACCTCTTGTCGCCGCCATCACTTTTCATCAGTTATTTGAAGGGATGGGCCTTGGAGGTTGCATTGCTCAGGCAAAGTTCAAAAACAGGGCAACAATACTAATGGGGCTTTTCTTCTGTTTGACAACGCCAATTGGTATAGCAATAGGAATTGCAGTAACCAAAACTTATGATGAAGACAGCCCAAAAGCACTTATTGTTGAAGGAATTTTAAATGCAGCATCTTCTGGTATCTTAATCTATATGGCTCTTGTTGATCTTCTTGCTGCGGATTTCATGAACCCTAGAATGCAAAGCAATGGAAAGCTTCAACTTCTTGCCAATGTTTCCCTTATTCTTGGAGCTGCCTTGATGTCTTTACTTGCCATTTGGGCATAG 1104 44.47 MPMPMPHFNPPSLLSLFFLLFLLLIPSVLAAPDCQCPEDSEDDGKRDETLALKYKVVAIATILVAGIIGVVIPLLGKLIPALSPEKDIFFIIKAFAAGVILATGFIHVLPDAYGNLTSSKLNEHPWGKFPFTGLVAMVAAIGTLMVDAGASSYYTRIHLNKAQPELNGDDEMRGGGCGAHDGHVHVHTHGTHGHAHGSADVGGSSTEILRHRVISQVLELGIVVHSVIIGIGLGVSESPETIRPLVAAITFHQLFEGMGLGGCIAQAKFKNRATILMGLFFCLTTPIGIAIGIAVTKTYDEDSPKALIVEGILNAASSGILIYMALVDLLAADFMNPRMQSNGKLQLLANVSLILGAALMSLLAIWA* 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22908363 22911139 + CsaV3_4G032400.1 Csa04g02214 527824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02214 367 PANTHER ZINC/IRON TRANSPORTER 24 367 - -
Csa04g02214 367 TIGRFAM zip: ZIP zinc/iron transport family 41 367 IPR004698 GO:0005385|GO:0016021|GO:0071577
Csa04g02214 367 Pfam ZIP Zinc transporter 53 364 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa04g02214 367 PANTHER ZINC TRANSPORTER 1 24 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02214 Csa-Chr4:22908363 Csa07g01214 Csa-Chr7:11924273 1.88E-123 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02214 K14709 - csv:101215851 662.529