Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g02242 | ATGTGGTATGCTCCCGATACAATAATAAGTATTGTTTTAGTGTTATTATTATTATTGGGATGGAAATTAGCTGATTGGATTTGGTTCCGCCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCCACGGCGACTTGAAGGAGAGAGCCGCCATGAGAGAAGAAGCAATGTCCAAGCCCATGAACTTCTCCAACCATATTGCTCCACGTGTCATTCCCTCTATCTATCATACCATCCAACGTTATGGCAAGAATTCATTTATGTGGCTTGGTCCCATACCAAGAGTGCACATAATGGACCCTGAACAACTCAAAACTGTGTTCTCATTCTACAATGATTTCCAAAAGCCAACTATGAATCCCTTTACCAAGTTGCTTGTACAAGGAATTGTAAATCTTGATGGAGAAAAATGGGTCAAACACAGAAAGATAATCAACCCTGCATTTCATTTAGAAAAGCTCAAGGATATGGTACCAGCATTCTATCACAGTTGTAACGAGATGGTTAGCAAGTGGGAAAGCATGGTCTCTAAAGAGGGATCTTGTGAGTTAGATGTAATGCCTTATCTAAAAAATATGGCTTCTGATGTGATTTCTCGGACTGCATTTGGGAGCAGCTATGAGAAAGGAAAAAAGATCTTCAAGCTTCAAACTGAACTAACTAATTTTGTGATTCAAACTACCTTAGGGATATATATTCCTGGATGGAGATTTCTACCCACAAAGTTAAACAGAAAAATGAAAGAGATAAGCAAAGAGATAACAACTTTGATATTGGGTATTATGGATGAAAGAGAAAAGTCTATGAAAGCAGGTGAAGCAATACAAACTGATCTATTAAGCATTCTCATGGAATCCAATATGAATGAAATTAAACAACATGGAAACAAAAAAGACATTGGAATGAGCATAGAAGATGTTATTGAAGAATGCAAGCTTTTCTATATTGCTGGCCAAGAAACTACAGCAACATTACTAGTCTGGACGATGATATTGTTGAGTTCATACTCAGAATGGCAAGAGCGTGCAAGAGCAGAAGTCTTTGAGATCTTTGGTAACAAGCAACCAAATTATGATGGTTTAAATAGACTAAAAGTTGTAACTATGATCTTCAATGAGGTCCTCAGGTTATACCCACCAGGGAGTCTGTTTGTTCGCATTGTTAGGAAAGAAACAAGACTTGGAAATTTGACTTTACCAGGAGGAGTAATGTTAGGCTTACCAATTGTTCTTATCCAACGTGACCCTGAGTTATGGGGAGAAGATGCACATGAATTCAATCCAGAGAGATTTTCTGGAGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTATACCATTTGGATGGGGTCCTAGAATATGCATAGGACAAACCTTTGCTATGATTGAAGCAAAAATGGCATTATCAATGATTCTACAACGTTTCTCATTTGAGCTTTCGCCATCGTACACACACTCTCCCATTGCCAGTTTAACAACACAACCTCAACATGGAGCTCATATCATACTACACAAACTCTAG | 1551 | 38.17 | MWYAPDTIISIVLVLLLLLGWKLADWIWFRPKKLEKLLRQQGFAGNSYRILHGDLKERAAMREEAMSKPMNFSNHIAPRVIPSIYHTIQRYGKNSFMWLGPIPRVHIMDPEQLKTVFSFYNDFQKPTMNPFTKLLVQGIVNLDGEKWVKHRKIINPAFHLEKLKDMVPAFYHSCNEMVSKWESMVSKEGSCELDVMPYLKNMASDVISRTAFGSSYEKGKKIFKLQTELTNFVIQTTLGIYIPGWRFLPTKLNRKMKEISKEITTLILGIMDEREKSMKAGEAIQTDLLSILMESNMNEIKQHGNKKDIGMSIEDVIEECKLFYIAGQETTATLLVWTMILLSSYSEWQERARAEVFEIFGNKQPNYDGLNRLKVVTMIFNEVLRLYPPGSLFVRIVRKETRLGNLTLPGGVMLGLPIVLIQRDPELWGEDAHEFNPERFSGGVSKATKNPSAFIPFGWGPRICIGQTFAMIEAKMALSMILQRFSFELSPSYTHSPIASLTTQPQHGAHIILHKL* | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23069281 | 23073033 | + | CsaV3_4G032670.1 | Csa04g02242 | 527852 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g02242 | 516 | SUPERFAMILY | Cytochrome P450 | 78 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | P450 superfamily signature | 455 | 464 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | P450 superfamily signature | 464 | 475 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | E-class P450 group I signature | 88 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | E-class P450 group I signature | 454 | 464 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PRINTS | E-class P450 group I signature | 464 | 487 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | PANTHER | CYTOCHROME | 9 | 512 | - | - | |
Csa04g02242 | 516 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 9 | 512 | - | - | |
Csa04g02242 | 516 | Gene3D | Cytochrome P450 | 71 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02242 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 457 | 466 | IPR017972 | GO:0005506|GO:0016705 | |
Csa04g02242 | 516 | Pfam | Cytochrome P450 | 89 | 498 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g02849 | Csa-Chr1:24999782 | Csa04g02242 | Csa-Chr4:23069281 | 0 | dispersed | |
Csa01g02967 | Csa-Chr1:26019911 | Csa04g02242 | Csa-Chr4:23069281 | 9.50E-176 | dispersed | |
Csa03g03836 | Csa-Chr3:33752488 | Csa04g02242 | Csa-Chr4:23069281 | 0 | dispersed | |
Csa03g03837 | Csa-Chr3:33762422 | Csa04g02242 | Csa-Chr4:23069281 | 3.03E-23 | dispersed | |
Csa03g04191 | Csa-Chr3:36748734 | Csa04g02242 | Csa-Chr4:23069281 | 6.40E-130 | dispersed | |
Csa04g02242 | Csa-Chr4:23069281 | Csa05g02526 | Csa-Chr5:26778582 | 1.79E-135 | dispersed | |
Csa04g02242 | Csa-Chr4:23069281 | Csa01g01963 | Csa-Chr1:16501446 | 2.13E-133 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g02242 | - | - | csv:101222756 | 1029.62 |