Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02353 ATGGCTGAAAATGCCTCCCAGGAGGGAAGATCTCTGGCTCTGACGCCTACTTGGTCTGTTGCTTCCGTGTTGACCATTTTCGTCGCAGTTTCATTGCTTGTAGAACGCTCCATTCATAGGCTAAGCTCTTGGCTGGGAAAAACTCATAGAAAACCCTTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTAATGCTGCTTGGTTTTATTTCTTTGCTTCTGACGGCAACATCAAGTCTAATATCAAATATCTGCATTCCATCCAAGTTTTATGATACATCTTTTATTCCGTGCTCTCAGTCGGAGATTGATGAACAAAATGCGGATAATTCTTCATCTGAGAAGCGAAAGCTATTTATGGTTTCTGTTTTCCCACATTTGAATAGGAGGATGCTAACTGTGAACAAAAATACATGCAAAGAGGGTCATGAGCCCTTTGTTTCCTATGAGGGACTTGAGCAATTGCATCGCTTTATCTTTGTGATGGCAGTTACTCATATTTCTTATAGTTGCTTAACCATGTTGTTGGCAATTGTGAAGATCCACAGTTGGAGAGAATGGGAAAATGAAGCTCACATGGACCACCATGATTTATTCAACGATACAACGAAAAAAAAGATAATGCAGAGACAATCTACCTTTGTACAATATCACACCTCCAATCCTTTAACCAGGAATAGCTTTCTTATCTGGATGACCTGTTTCTTTAGGCAATTTGGGCGTTCTGTTGTTCGTTCTGACTACCTTACACTTCGCAAAGGCTTCATCACGAATCACAACCTCTCGTCAAAATATGATTTCCATAGCTACATGGTTCGTTCTATGGAAGAAGAATTCCAGAGAATAGTTGGTGTGAGTGGTCCGTTATGGGGATTTGTCGTAGCTTTTTTGCTGTTTAATGTGAAAGGCTCCAACCTTTACTTTTGGATAGCAACTATTCCTGTTACTCTTGTTCTTTTAGTGGGCACAAAGTTACAGCATGTTATTGCAACTTTGACGTTGGAGAATGCTGGTATAACCGGATTCTTTTCTGGAGCAAAGCTGAGGCCCCGTGATGATCTTTTCTGGTTTAAGAAGCCTGAACTTCTGTTGTCCTTGATCCATTTTGTTCTTTTCCAGAATGCTTTCGAATTGGCTTCGTTCTTCTGGTTCTGGTGGCAATTTGGATATAGTTCTTGCTTCATTAGCAATCATCTGCTTGTCTATGTAAGACTAATCTTGGGTTTTGCTGGACAATTTCTTTGCAGCTATAGCACCTTGCCCCTATACGCACTGGTTACTCAGATGGGAACAAACTACAAGGCTGCCTTAATTCCTCAAAGAATAAGGGAAACAATCCATGGGTGGGGTAAGTCAGCTAGAAGGAAGAGAAGGCTCCGGATATTTACTGATGATGCCACAATCCACACGGAAACAAGCACCGTGATGTCACTTGAGGACGATGACAACCAACATGTTGATACACCTAAAGCTGCAACTGGCTATGCCATAATTGAGATGCAGCCACCTACTGCAGCAAATGTGTCCGCCTCTGTTACTAATGATGCATCACGTGCGGTTAGAACTCCCCTTCTTCAGCCCTCTCTGTCTCTTTCATTGCCTGTGGCTCAAAACTTCATTGACGGAGCCCCTTTAAGAAGCTCATCAATGCCGGCTCAAAACTTCGATGCCGAAAACTCTTTAAGAAGCTCATCTATGCCGAGATAA 1707 42.06 MAENASQEGRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSSWLGKTHRKPLFEAVEKMKEELMLLGFISLLLTATSSLISNICIPSKFYDTSFIPCSQSEIDEQNADNSSSEKRKLFMVSVFPHLNRRMLTVNKNTCKEGHEPFVSYEGLEQLHRFIFVMAVTHISYSCLTMLLAIVKIHSWREWENEAHMDHHDLFNDTTKKKIMQRQSTFVQYHTSNPLTRNSFLIWMTCFFRQFGRSVVRSDYLTLRKGFITNHNLSSKYDFHSYMVRSMEEEFQRIVGVSGPLWGFVVAFLLFNVKGSNLYFWIATIPVTLVLLVGTKLQHVIATLTLENAGITGFFSGAKLRPRDDLFWFKKPELLLSLIHFVLFQNAFELASFFWFWWQFGYSSCFISNHLLVYVRLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKSARRKRRLRIFTDDATIHTETSTVMSLEDDDNQHVDTPKAATGYAIIEMQPPTAANVSASVTNDASRAVRTPLLQPSLSLSLPVAQNFIDGAPLRSSSMPAQNFDAENSLRSSSMPR* 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23944644 23954167 - CsaV3_4G033790.1 Csa04g02353 527963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02353 568 PANTHER MLO-LIKE PROTEIN 11 4 490 - -
Csa04g02353 568 PANTHER MLO-LIKE PROTEIN 1 4 490 IPR004326 GO:0006952|GO:0016021
Csa04g02353 568 Pfam Mlo family 10 466 IPR004326 GO:0006952|GO:0016021
Csa04g02353 568 MobiDBLite consensus disorder prediction 545 568 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01923 Csa-Chr3:15003227 Csa04g02353 Csa-Chr4:23944644 1.92E-162 dispersed
Csa04g02353 Csa-Chr4:23944644 Csa05g02923 Csa-Chr5:29673306 0 dispersed
Csa04g02353 Csa-Chr4:23944644 Csa06g01679 Csa-Chr6:14713131 2.33E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02353 K08472 - csv:101207170 1132.86