Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02367 ATGGCGGTTGTTACTGATCCCCTTGCTTCCATGCAACTTCTCGCCAATACCATTCCAGCTCCGCCGTATGCGGCAGCCGCTGTTCTGGGTGGCGTCTCTTTGGTACTTTCCGTGTTTTTTGTTGCTGATTGTAGAAAGAAACGTCGGAATTTTCTCCCTCCGGTGCCGGCGGTTCCGGGGGTTCCGGTGTTGGGGAATTTGCTGCAGTTGAAGGAGAAGAAGCCTCACAAGACATTTGCTCGATGGGCGGAGACGTACGGTGCGGTTTATTCAATAAGAACCGGCGCTTCCACTGTGATTGTTCTCAACACCACAGAGGTTGCCAAAGAGGCTATGGTGACGAGGTATGGTTCGATTTCGAGTCGAAAGCTAAGCAAAGCTCTTACAATCTTGACTGCTGATAAATGCATGGTTGCTATGAGTGATTACAATGAGTTTCACAAGATGGTGAAGAGATATATATTGGCTAATGTGTTGGGGGCTAATGCTCAGAAGAAACACAGACAAAGGAGAGACGCCATGATTGAAAATATTTCTAGGGAGTTGTTTGCTCATGTGAAGGAGTTTCCATTAGACACTGTTAATTTTCGGAAGATCTTCGAAGCCGAACTCTTTCGACTCGCGCTTAAAGAAACGCTTGGGAAGGATATTGAGTCGATATATGTGGATGGGCTTGGTACGACATTGCCGAGGGAAGATCTGTTTAGGATTTTAGTGATTGATCCAATGGAGGGTGCGATTGAGGTTGATTGGAGGGATTTCTTCCCATATTTGAGATGGATTCCAAACAAGAGGGTGGAGAATAAAATAAGGAATATGGATTTTCGAAGGCGAATGACAATGAAGAAACTAATGGAGGAGCCAAAGAAACGAATTGCAGCAGGGGAGGAGACGTATTGCTATGCCGATTTCTTGTTATCTGAAGCGAAAACACTTACGGAGGATCAAATATCCATGTTGCTTTGGGAGACGATCATTGAAACTTCTGACACAACTTTAGTTGTAACAGAATGGGCGATGTATGAACTTTCGAAAGATCCAAGACGACAGGACTATCTATATCAGCAGATACAGAGTGTTTGTGGATCTGCAACGCTTACTGAAGAAAACTTGTCACAGCTACCATATCTGACAGCTATTTTTCATGAAACTCTTCGGAAGCATAGTCCGGTCCCAGTCGTCCCATTACGGTATGCGCATGAAGACACCCAGTTAGGCGGGTACTTCGTTCCTGCAGGGAGTGAGATCGCCGTGAACATTTACGCATGCAACATGGACAAGGATCATTGGGAAAGCCCTGAGGAATGGAAGCCAGAGAGGTTTCTGGATGACAAGTATGATCCAATGGATTTGCACAAAACCATGGCCTTTGGAGGAGGGAAGAGGGTGTGTGCAGGTGCTCTCAAGGCAATGCTGATAGCTTGCACAACCATTGGAAGGATGGTTCAAGAGTTTGAGTGGAAGCTGAGGGAAGGAGAAGAGGAGAAGGTCGACACTCTTGGCCTCACCGCTCGCAAGCTTCAGCCACTGCACGTGGTCATAAAACCAAGAAACAACTGA 1560 46.35 MAVVTDPLASMQLLANTIPAPPYAAAAVLGGVSLVLSVFFVADCRKKRRNFLPPVPAVPGVPVLGNLLQLKEKKPHKTFARWAETYGAVYSIRTGASTVIVLNTTEVAKEAMVTRYGSISSRKLSKALTILTADKCMVAMSDYNEFHKMVKRYILANVLGANAQKKHRQRRDAMIENISRELFAHVKEFPLDTVNFRKIFEAELFRLALKETLGKDIESIYVDGLGTTLPREDLFRILVIDPMEGAIEVDWRDFFPYLRWIPNKRVENKIRNMDFRRRMTMKKLMEEPKKRIAAGEETYCYADFLLSEAKTLTEDQISMLLWETIIETSDTTLVVTEWAMYELSKDPRRQDYLYQQIQSVCGSATLTEENLSQLPYLTAIFHETLRKHSPVPVVPLRYAHEDTQLGGYFVPAGSEIAVNIYACNMDKDHWESPEEWKPERFLDDKYDPMDLHKTMAFGGGKRVCAGALKAMLIACTTIGRMVQEFEWKLREGEEEKVDTLGLTARKLQPLHVVIKPRNN* 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24040378 24043667 + CsaV3_4G033930.1 Csa04g02367 527977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02367 519 Gene3D Cytochrome P450 45 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 SUPERFAMILY Cytochrome P450 53 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 Pfam Cytochrome P450 57 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02367 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Csa04g02367 519 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 23 518 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02367 Csa-Chr4:24040378 Csa03g03693 Csa-Chr3:32857081 2.38E-57 dispersed
Csa04g02367 Csa-Chr4:24040378 Csa01g00905 Csa-Chr1:5635608 1.96E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02367 K04122 - csv:101209283 1005.74