Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02381 ATGGCTTCCTCTGTCGCATCTTCAGTTACTAACCAACTAGATAAAATTACTGCACCCTATGGCTCATGGAAGTCTCCGATCACCGCCGACGTTGTGTCCGGCGCCTCCAAGCGAATCGGCGGTGCTGTTGTTGATGGTTCCGGTCGCCTTGTCTGGCTTGAATCACGGCCCTCTGAATCTGGGCGGGAAGTTCTTGTCAAGGAACCGGAGAAGCTTGGCGGTGAGAATATTGATGTTACTCCAAAGGAGTTTTCAGTTCGGACTACTGCACAGGAGTACGGCGGTGGTGCTTTCATGGTGTCTGGGGACACAGTAGTCTTCTCTAATTTTGAGGATCAGAGACTGTATAAGCAATCAATTAAACCCCATGATTCTGCTCCTCGGCCCCTTACTCCAGATTATGGTGGTCCGTTGGTTAGTTATGCTGATGGAGTGTTTGATTTATGTTTCAATCGTTATATCGCTGTACGGGAAGATCGGCGCATCAGTAGCTCAAGTCCAACTACGACCATTGTATCTATAAAACTCGAAGGGAAGGCTATAGAAGATCCAGAGGTACTTGTTGAGGGAAGTGACTTTTATGCTTTTCCTCGAGTGGATCCCAAAGGGAAACGGATTGCATGGATCCAATGGCATCACCCTAACATGTCATGGGACAAATCAGAGCTTTGGGTTGGTTACTTTTCTGATAATGGTGAAATCAACAAGCGTGTCTGTGTTGCTGGTTGTGAACCAGAGCTAGTGGAATCACCAACTGAGCCTAAGTGGTCTTCTGAGGGAGAACTTTTTTTTGTTACTGATAGGAAAAATGGGTTCTGGAATCTATACAAATGGTTTGAGGCAGATAATGAGGTGTCTCCAGTTTATTCTTTGAATGCGGAGTTTTCGCGACCATTTTGGGTTTTTGGCATAAACTCTTATGGTTTCTTACCTGGCAATGAAGGAGAAAACTATATAATTTGCAGCTATAGGCAGCATGGGAGGTCATATCTTGGAGTTCTGGGTGATGGACAAAGCTCTCCATCTCTGCTTGATATTCCCTTTTCAGATATTGATAACATTACTATTGGGAACCATTGTTTTTATGTGGAGGGAGCGTCAGCCTTTCATCCACCATCAATTGCTAAGGTTACTCTGAAAGATAAAAGCTTGAAAGTAGATGAGTTCACTATTATCTGGTCATCATCGCCTGATATTTTGACATATAAGTCGTACTTCAGTACTCCAAAGTTAATAGAATTTGCAACAGAAGTGCCTGGTGAAAAGGCTTATGCCTACTTTTATCCACCCTTCAATCCCATTTACCATTCTAGTGGGGATGAAAAGCCTCCATTGTTGCTGGAAAGCCATGGAGGCCCAACGGATGAATCGCGTGGAATATTAAACCTAAGAGTTCAGTATTGGACTAGTCGAGGATGGGCTTTTGTCAATGTTAACTATGGTGGAAGCTCTGGTTACGGGAGGGCCTATCGAGAAAGGCTTTTGAGGAAGTGGGGAATTGTTGACGTCAATGACTGTTGCAGCTGTGCGAAATATTTGGTCGATTCAGGAGTAGTTGATGCAGAACGATTGTGCATCGCTGGGGAATCTGCTGGGGGATACACTACCCTAGCTGCTCTTGCTTTCAGAGATACATTCAAGGCAGGAGCTTCCTTGTATGGTGTAGCCGACTTGCATATGTTGAATGCTGAAATGCACAAATTTGAATCTCATTATATTGGTAATCTTGTTGGAGATGAAAGAGACTTTTATGAAAGGTCGCCAATTAATTTTGTCGAAAAATTCTCTTGTCCATTAATCTTGTTCCAAGGATTGGATGACAAAGTTGTGCCTCCTGTTCAAGCACGTAAGATCTACCAAGCATTGAAAGAGAAGGGCCTTCATGTGGCTTTAATTGAATACGAAGGAGAACAACACGGCTTTCGCAAGGCGGAGAATATAAAATTTACGTTGGAACAACAAATGCTGTTCTTTGCAAGAATGGTGGGACACTTTGAAGTTGCTGATTAG 2010 43.68 MASSVASSVTNQLDKITAPYGSWKSPITADVVSGASKRIGGAVVDGSGRLVWLESRPSESGREVLVKEPEKLGGENIDVTPKEFSVRTTAQEYGGGAFMVSGDTVVFSNFEDQRLYKQSIKPHDSAPRPLTPDYGGPLVSYADGVFDLCFNRYIAVREDRRISSSSPTTTIVSIKLEGKAIEDPEVLVEGSDFYAFPRVDPKGKRIAWIQWHHPNMSWDKSELWVGYFSDNGEINKRVCVAGCEPELVESPTEPKWSSEGELFFVTDRKNGFWNLYKWFEADNEVSPVYSLNAEFSRPFWVFGINSYGFLPGNEGENYIICSYRQHGRSYLGVLGDGQSSPSLLDIPFSDIDNITIGNHCFYVEGASAFHPPSIAKVTLKDKSLKVDEFTIIWSSSPDILTYKSYFSTPKLIEFATEVPGEKAYAYFYPPFNPIYHSSGDEKPPLLLESHGGPTDESRGILNLRVQYWTSRGWAFVNVNYGGSSGYGRAYRERLLRKWGIVDVNDCCSCAKYLVDSGVVDAERLCIAGESAGGYTTLAALAFRDTFKAGASLYGVADLHMLNAEMHKFESHYIGNLVGDERDFYERSPINFVEKFSCPLILFQGLDDKVVPPVQARKIYQALKEKGLHVALIEYEGEQHGFRKAENIKFTLEQQMLFFARMVGHFEVAD* 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24153680 24160639 + CsaV3_4G034070.1 Csa04g02381 527991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02381 669 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 8 669 - -
Csa04g02381 669 Pfam Prolyl oligopeptidase family 463 663 IPR001375 GO:0006508|GO:0008236
Csa04g02381 669 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 8 669 - -
Csa04g02381 669 SUPERFAMILY alpha/beta-Hydrolases 418 662 IPR029058 -
Csa04g02381 669 Gene3D alpha/beta hydrolase 401 666 IPR029058 -
Csa04g02381 669 SUPERFAMILY Tricorn protease N-terminal domain 96 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01108 Csa-Chr2:10840551 Csa04g02381 Csa-Chr4:24153680 2.89E-19 dispersed
Csa04g02381 Csa-Chr4:24153680 Csa05g00050 Csa-Chr5:229072 1.82E-10 dispersed
Csa04g02380 Csa-Chr4:24129161 Csa04g02381 Csa-Chr4:24153680 4.17E-77 tandem
Csa04g02381 Csa-Chr4:24153680 Csa04g02382 Csa-Chr4:24161959 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02381 - - csv:101221995 1365.52