Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02406 ATGGGTGTAGTTTTTCTATCTATTTTGATCTTTTTTCTCACTCTATTATGGTACATTTCTTTAAAGAGAGACAAGAAGGCAGCCATTAGAGATGGAACTAAGCTCCCTCCTGGTTCTTTAGGATGGCCTTATATTGGAGAAACTCTTCAACTCTATTCTCAACACCCCGATTTTTTTTTCGCTGCCAAACAAAAAAGGTATGGAGAGATTTTTAAGACCCATATACTTGGATGTCCTTGTGTGATGTTGGCTAGTCCTGAGGCAGCGAGATTTGTGTTAGTGACACAGGCTCATTTGTTTAAACCAACATACCCCAAAAGCAAAGAGCTTTTAATTGGCCCATCTGCTCTGTTTTTTCACCAAGGTGATTACCATTGCCGTCTAAGGAAGCTGGTTCAGAGCTCTCTTTCTTTGGACTCCATCCGTACCTTAGTCCCCGATATCGACTCCGTGGCCGCCTCCGCCCTCGACTCCTGGGCCACCTCCGGTGTTATTAACACCTTTCATGAAATGAAAAAGATATCATTTGAAGTTGGGATATTGACCATTTTTGGCCATTTGGAAGCTGCTTACAAAGATGACCTTAAAAAAAACTACAGCATATTGGAAGCAGGCTACAATTCTTTTCCCACCAACATTCCAGGAACTCCATACAAAAAGGCACTCTCAGCAAGAAAGAGGCTAAATAAAATCCTAGGTGACATAATTCATGAGAGGGGAGAAAGAAGGCTGAGAGAAAAGGATTTATTGGGGAGCCTTCTCAATTCCATTGATGATGAATGTGAAGTTAAAATAAGTGATTCCCAAATAGCAGATAACATAATAGGAGCGCTTTTTGCTGCTCAAGACACCACTGCCAGTGTCATGACTTGGATTGTTAAGTACCTCCATGACCGTCCCAAGCTTCGTCAATCCATAAAGGCTGAGCAAGAGGAAATTTTAAAATTAAATTGTGAGAATAATCAAGGGTTAAATTGGGTACAGACAAGGAACATGCCAATCACTTACAAGATGGTATTGGAGAGCTTAAGGATGGCCAGCATTATATCATTCACTTTTAGAGAGGCTGTAGCTGATGTGGAATACAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTTCGGAACATCCATCACAGTCCAGAATATTTTCCTGATCCTCACAATTTCGACCCTTCTAGATTTGAGGTTGCACCAAAACCCAATACATTTATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCCAAGCTCGAGATCTTGATCATGATTCATCATCTAGTCACCAAGTTCAGGTGGGAATTGGTTGGCTCGCAAAACAGGGTTCAGCATAGTCCATTTCCCGTTCCCTTTCAAGGCCTTCCAGCGAGATTTTGGAAGATAGCCCATTAG 1413 41.83 MGVVFLSILIFFLTLLWYISLKRDKKAAIRDGTKLPPGSLGWPYIGETLQLYSQHPDFFFAAKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTQAHLFKPTYPKSKELLIGPSALFFHQGDYHCRLRKLVQSSLSLDSIRTLVPDIDSVAASALDSWATSGVINTFHEMKKISFEVGILTIFGHLEAAYKDDLKKNYSILEAGYNSFPTNIPGTPYKKALSARKRLNKILGDIIHERGERRLREKDLLGSLLNSIDDECEVKISDSQIADNIIGALFAAQDTTASVMTWIVKYLHDRPKLRQSIKAEQEEILKLNCENNQGLNWVQTRNMPITYKMVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFPDPHNFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTKFRWELVGSQNRVQHSPFPVPFQGLPARFWKIAH* 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24307454 24309702 - CsaV3_4G034320.1 Csa04g02406 528016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02406 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Csa04g02406 470 PANTHER CYTOCHROME P450 26 8 467 - -
Csa04g02406 470 Pfam Cytochrome P450 36 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02406 470 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 467 - -
Csa04g02406 470 Gene3D Cytochrome P450 25 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02406 Csa-Chr4:24307454 Csa05g00809 Csa-Chr5:5807093 5.50E-91 dispersed
Csa01g02439 Csa-Chr1:21622706 Csa04g02406 Csa-Chr4:24307454 0 transposed
Csa01g03290 Csa-Chr1:29234671 Csa04g02406 Csa-Chr4:24307454 4.43E-80 transposed
Csa02g01949 Csa-Chr2:18263195 Csa04g02406 Csa-Chr4:24307454 2.24E-72 transposed
Csa03g01774 Csa-Chr3:13322655 Csa04g02406 Csa-Chr4:24307454 5.50E-68 transposed
Csa04g00714 Csa-Chr4:4840262 Csa04g02406 Csa-Chr4:24307454 0 transposed
Csa06g02415 Csa-Chr6:21570911 Csa04g02406 Csa-Chr4:24307454 6.55E-74 transposed
Csa02g01959 Csa-Chr2:18394553 Csa04g02406 Csa-Chr4:24307454 2.28E-60 wgd
Csa04g02406 Csa-Chr4:24307454 Csa07g00762 Csa-Chr7:5351643 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02406 K09843 - csv:101213916 950.273