Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02453 ATGGAACCTCACGCACTTACTTGTCTTTCTCTTTCTCTTCTCTTGATCAGTACTCTCATTCTTCTTTCCAAGCTCAGAAAACTGAGAAACCAAAGGAAACTCCCACCAACCCCACCTTCTCTTCCCATAATCGGTCACCTCCATCTCCTCAAACAACCTTTCTACCGAGTACTACACGATCTCTCCAACAAATACGGTCCAATTCTATCCCTCACAATCGGCTCCCGTCCCGTGGTAGTCGTCTCCTCCCCCACTGCCGTCCGTGAATGCTTCACCAAAAACGACATCGTATTTGCCAACCGCCCTCGCTTACTCTCAGGAAAATACATCAATTACAACTACACCGCCATGGGATTTGCACCGTACGGGCAGCACTGGCGCAACATGCGCCGCATCGCCACAACAGAGCTACTCTCCAATCACCGGCTCAACACGTATCTCAACATTCGAGTGGAAGAACTGAAGTTATGGGTAAAGAATAGTTTGTACAAATGGAGTAGTGGGCGGGGGGATTTTGTTGTGGTGGATATGAAGTACAAATTGAAGGAACTTTCATTCAATACGGTGATGAGGATGATCAGTGGGAAAAGGTATTACGGTGTGGAAGTGGAGGATGTGGAAGAAGCATTGGAATTTAGAGAGATAATGAAAGAGCTACTTGAACTGAGTGGGGCTACTAATGCGGCAGATTTTTTTACAATTTTGAGAGTGTTCGATATTGAAGGAGTTAAGAAGAAGATGATGAAAGCGAGTGGGAGAGCAGATGTTTTTCTACAGAAACTTATTGATGAAGAGAGAGAAAAGGGAGTTTCACGTTGGCCGGAGGAAAAACAGAAAGAGGGGAAAACGTCTATGATTCGAACTTTGCTTTCCTTGCAGGAATCTCAACCTCAGTATTACTCCGATGATATAATCAAGGGTCATGTTCTGACGATGTTGGCTGCAGGTACAGATACAACTTCAGGAACAATAGAATGGGCAATGTCACTACTTTTGAATCATCCAATGGTGATGGAGAAAGCTTGGATCGAGATAAGAGACTGTATCGGAGAAAATCAAATGGTGGAGGAAGGTGATGTGAGTAAACTAAAATATTTAGAAGCTATAATATACGAGACTCTTAGAATGTTTCCAGCAGCTCCATTGTTGGTTCCACACGAATGCAGTGAGGATTGTAGTATTGAAGGATTTGAGATACCCAAAGGAACGATGTTGATGGTGAATGCATGGGCCATTCATAGGGATCCGAAAGTGTGGGAGGATCCCACCAGCTTTCGACCGGAAAGGTTTCTAAATTGGGAAGGTGTCGAATCGTACAAGTGGATACCTTTTGGAATGGGGAGGAGGGCTTGTCCAGGGTTTGCTCTGGCCCAACGATCAATGGGATTGACATTAGCAACTCTGATTCAGTGCTTTGAGTGGGAGAAAGTTGATGAAAATGAACAAATAGACTTGTCTGAAGGGAGTGGAATCACTATGCCAAAAGCGAAAGCTTTGGAGGCAATGTGTAAACCTCGTAACTCAATGCTTCACTTGCTTGCTCAGCTTTGA 1551 44.42 MEPHALTCLSLSLLLISTLILLSKLRKLRNQRKLPPTPPSLPIIGHLHLLKQPFYRVLHDLSNKYGPILSLTIGSRPVVVVSSPTAVRECFTKNDIVFANRPRLLSGKYINYNYTAMGFAPYGQHWRNMRRIATTELLSNHRLNTYLNIRVEELKLWVKNSLYKWSSGRGDFVVVDMKYKLKELSFNTVMRMISGKRYYGVEVEDVEEALEFREIMKELLELSGATNAADFFTILRVFDIEGVKKKMMKASGRADVFLQKLIDEEREKGVSRWPEEKQKEGKTSMIRTLLSLQESQPQYYSDDIIKGHVLTMLAAGTDTTSGTIEWAMSLLLNHPMVMEKAWIEIRDCIGENQMVEEGDVSKLKYLEAIIYETLRMFPAAPLLVPHECSEDCSIEGFEIPKGTMLMVNAWAIHRDPKVWEDPTSFRPERFLNWEGVESYKWIPFGMGRRACPGFALAQRSMGLTLATLIQCFEWEKVDENEQIDLSEGSGITMPKAKALEAMCKPRNSMLHLLAQL* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24601161 24604034 - CsaV3_4G034790.1 Csa04g02453 528063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02453 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Csa04g02453 516 PANTHER - 28 513 - -
Csa04g02453 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 Gene3D Cytochrome P450 27 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 Pfam Cytochrome P450 35 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa04g02453 516 PANTHER CYTOCHROME P450 82C3-RELATED 28 513 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02453 Csa-Chr4:24601161 Csa06g02979 Csa-Chr6:25742453 0 dispersed
Csa04g02460 Csa-Chr4:24629124 Csa04g02453 Csa-Chr4:24601161 1.62E-168 dispersed
Csa04g02453 Csa-Chr4:24601161 Csa04g02454 Csa-Chr4:24605411 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02453 - K13260 csv:101207002 1013.83