Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g02454 | ATGGAACAACAAACCTCTTTCTTCTTCTCTCAGGATCATCATTTCCATCCAATCTCTATCCCTCTCTTAGCCATTTTCTTAACTTCTCTCTTTCTCATTTCCAAATTTCGAAGAACACAGCACACAAAACTGCTGCCACCAAGCCCTCCTTCTCTTCCTGTAATCGGTCACCTTCATCTTCTCAAAGAACCATTCCACCAAATGTTACAAGATTTCTCTAAAAAATACGGCCCTGTTTTCTCTCTCACTCTCGGTTTCCGCCCCCTCGTAGTTGTCTCCTCCCCTTCCGCCGTACAAGAATGCTTCACCAAAAACGACATTGTTTTCGCCAGCCGCCCCCGTATGCTGTCCGGAAAGATCCTCAATTACGATTACACAGCTGTTGGTGCCACCGCGTACGGGCAGCACTGGCGTATCATGCGACGGATAGCTACCACCGAATTGCTGTCCACCAAGCGTCTCAACGACTTGAGTAAAATCAGAGAAGAGGAGGTGAAGTTGTGGGTGAAAAGATTGTACGGATCAGTGACGAGGGCGGAAGTTAACAAGGGAGGTAGAGTGGGATTAAGGTCGAAACTGACGGAGCTTTCGTTCAATATCGCGTTGATGTTAATGGCGGGGAGAAGGTACTTTGGAGATGAAATGGAAGCGGGGGAGAGTGAGGAGGCGAAGGAGTTGAAGGAGACGATGAAGCAAGTTCCTCTGTTGAGTGGAGCTTCGTATCCGGCGGACTTTTTGTCGGTTTTGAAGTTGATTGATTTTCAAGGATTTAGGAAGAGATTGGCGAAGGTGAGAGTGGATGGAGATGCATTTGCTCAAAGTCTGGTGGATGAAAGACGGAAATTGAAGGGTTCTTGGTGTGAGAGGAAGACGATGATTGATAGTATGTTGTGTTTGCAGGAGTCAGACCCTGAGTATTATAAGGATGATATTATTAAGGGACAATTCTTGACTTTACTTGCTGCAGGAACCGATACAACAGCAAGCACGTTAGAATGGGCAATGTCCCTACTCCTAAACCATCCAACTGTTCTAGAGAAGGCTTGGACTGAGATAAACCAAGTTGTTGGAGACCAAAGACTAATAAGGGAAGCTGATACAAACAAGCTACACTATCTTCAAGCCATAATCAACGAAACCTACCGTCTATTTCCCGCTCTTCCAATACTTGTACCACGTGAATCATCAGAAGATTGCACGATTGGAGGGTTTGACATTCCAAAAGGAACCATGTTGGTGGTGAATGCTTGGGCCGTCCATCGAGACCCCAACGTGTGGGAAGATCCTAACTGTTTTAAACCCGAGAGGTTTAAACAAGGGGAAACTGTGGAGGTCAATAAATTGTTGCCATTCGGAATGGGACGAAGGGCTTGTCCGGGGGCTGGGCTTGCTCATAGGGTGGTGTCTTTGGCTTTGGCTACTCTTATTCAATGCTTTGAATGGGGCAAACTCGACAACCAAAAAGATGTTGACTTGTGTCCAGGAATTGGACTCACTATGCCTAAAGCTATTCCTCTTGAAGCTATGTGCAAACCTCGTGCTTCCGTCACACATTTACTATCACAACTTTGA | 1572 | 46.06 | MEQQTSFFFSQDHHFHPISIPLLAIFLTSLFLISKFRRTQHTKLLPPSPPSLPVIGHLHLLKEPFHQMLQDFSKKYGPVFSLTLGFRPLVVVSSPSAVQECFTKNDIVFASRPRMLSGKILNYDYTAVGATAYGQHWRIMRRIATTELLSTKRLNDLSKIREEEVKLWVKRLYGSVTRAEVNKGGRVGLRSKLTELSFNIALMLMAGRRYFGDEMEAGESEEAKELKETMKQVPLLSGASYPADFLSVLKLIDFQGFRKRLAKVRVDGDAFAQSLVDERRKLKGSWCERKTMIDSMLCLQESDPEYYKDDIIKGQFLTLLAAGTDTTASTLEWAMSLLLNHPTVLEKAWTEINQVVGDQRLIREADTNKLHYLQAIINETYRLFPALPILVPRESSEDCTIGGFDIPKGTMLVVNAWAVHRDPNVWEDPNCFKPERFKQGETVEVNKLLPFGMGRRACPGAGLAHRVVSLALATLIQCFEWGKLDNQKDVDLCPGIGLTMPKAIPLEAMCKPRASVTHLLSQL* | 524 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24605411 | 24607480 | - | CsaV3_4G034800.1 | Csa04g02454 | 528064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 97 | 118 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 196 | 214 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 415 | 439 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | Gene3D | Cytochrome P450 | 32 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | Pfam | Cytochrome P450 | 46 | 494 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 23 | 517 | - | - | |
Csa04g02454 | 523 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa04g02454 | 523 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 23 | 517 | - | - | |
Csa04g02454 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506|GO:0016705 | |
Csa04g02454 | 523 | SUPERFAMILY | Cytochrome P450 | 46 | 513 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g02454 | Csa-Chr4:24605411 | Csa06g02979 | Csa-Chr6:25742453 | 2.62E-172 | dispersed | |
Csa04g02453 | Csa-Chr4:24601161 | Csa04g02454 | Csa-Chr4:24605411 | 0 | tandem | |
Csa04g02454 | Csa-Chr4:24605411 | Csa06g02975 | Csa-Chr6:25719827 | 6.46E-162 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g02454 | K13260 | - | csv:101207242 | 1027.7 |