Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02491 ATGATTTCTCCCCTCACCACTAACCACCTGGACCCAATGGTTCTTTCCTTCCGCCTCTCTCTTTCCATTCTTCTTCATCTTCATCCACTATTCTCTGCCTCCGCTTATGCTCACTGGACGGTGAACTCTTTGCCCGGATTCTCAGGGGACCTTCCTTTCTCGCTGGAAACAGGATACGTAGGAGTTGGAGATCGGGAGGAGTTTCAATTGTTTTATTACTTTGTAAAAACATATTCAAATCCCAAAACGGATCCTCTCATTCTGTGGCTTACCGGAGGCCCTCGTTGCTCTTCTCTCTCTGGTCTCGCTTTTGAGAGTGGTCCAATCAATTTTGAGGGAGAGCTAAAGGAGGGAAGCCTACCTCAAGTACTCATAAACCCATACTCATGGACTCAGAACTCCAGTATAATATATCTAGATTTACCGGTTGGCACGGGTTTTTCATATACTAAAACCTCACAAGATCATAAATCAGGAGATCACGAGCAAGTTCAACATTCCCTTCAATTTTTGAAAAAGTGGTTCGATGATCATCCAGAATTTATATCAAATCCATTTTATATTGCTGGAAATTCTTATTCTGGTATGATTGTTCCAATTGTTGCTCTACAAATTTTAGAAGGAACTTATAAACATATTTTTTCATTTATAAATTTCCAGGGATACATACTCGGAAATCCTTTCACTATTCCTCATGCAAGTGAAAATTTTCGAATTCTATTTGCTCGTAATATGGCCCTCATCTCAGATGAATTGTATGAGTCGTTGGAAACTAGTTGTCAAGGAGAATATGTAAACATTGATCCTAACAATGTCGAATGCTTAAAACATTACGATACATATACAAAGTGTGCTTCTGTAGTTAAACAAGGATGTATTTTATGGCCCAAATGTCCATCATTAAAAGAACCACAGACAAGGTTTGGTCAAAGAAGATCTCTCAAGAGCAGTTTAGTAGGTCAAAGATGTCGTCAATATGATGCCATACTTGCCTACTATTGGGCTAACAATGACCAAGTTCGAAAAGCACTCCATATACATGAGGGAAGCATTGGAGAGTGGATTAGATGTCGTGGAAAAGAATATTACAATTTTGAGTTGACCAGTGCTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGTTATCGATCGTTAATCTATAGTGGAGATCATGATATGGTAGTGCCGCATATGGAAACTCATGCATGGATCAAAGCTTTAAATTATTCTGTAGTAGATGATTGGAGGCCTTGGTTTATCGATGATGAAGTTGGCGGATACACCAGAAGTTTTGCAAATAATATGACATTTGTAACGGTCAAAGGTGGAGGACATACACCAGAATATTTACGAGAAGAATCCAGCATAGTTTTTAAGAGATGGATAATAGGAGAATCCTTATGA 1404 38.82 MISPLTTNHLDPMVLSFRLSLSILLHLHPLFSASAYAHWTVNSLPGFSGDLPFSLETGYVGVGDREEFQLFYYFVKTYSNPKTDPLILWLTGGPRCSSLSGLAFESGPINFEGELKEGSLPQVLINPYSWTQNSSIIYLDLPVGTGFSYTKTSQDHKSGDHEQVQHSLQFLKKWFDDHPEFISNPFYIAGNSYSGMIVPIVALQILEGTYKHIFSFINFQGYILGNPFTIPHASENFRILFARNMALISDELYESLETSCQGEYVNIDPNNVECLKHYDTYTKCASVVKQGCILWPKCPSLKEPQTRFGQRRSLKSSLVGQRCRQYDAILAYYWANNDQVRKALHIHEGSIGEWIRCRGKEYYNFELTSAFPYHVNLSSKGYRSLIYSGDHDMVVPHMETHAWIKALNYSVVDDWRPWFIDDEVGGYTRSFANNMTFVTVKGGGHTPEYLREESSIVFKRWIIGESL* 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24796951 24799853 - CsaV3_4G035170.1 Csa04g02491 528101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02491 467 Pfam Serine carboxypeptidase 45 462 IPR001563 GO:0004185|GO:0006508
Csa04g02491 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Csa04g02491 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Csa04g02491 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Csa04g02491 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Csa04g02491 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 465 IPR001563 GO:0004185|GO:0006508
Csa04g02491 467 SUPERFAMILY alpha/beta-Hydrolases 40 462 IPR029058 -
Csa04g02491 467 Gene3D alpha/beta hydrolase 34 467 IPR029058 -
Csa04g02491 467 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 34 465 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02491 Csa-Chr4:24796951 Csa07g01623 Csa-Chr7:16753143 1.43E-112 dispersed
Csa04g02493 Csa-Chr4:24807676 Csa04g02491 Csa-Chr4:24796951 2.56E-07 dispersed
Csa04g02489 Csa-Chr4:24787778 Csa04g02491 Csa-Chr4:24796951 1.21E-96 proximal
Csa04g02490 Csa-Chr4:24789162 Csa04g02491 Csa-Chr4:24796951 4.38E-106 tandem
Csa04g02491 Csa-Chr4:24796951 Csa04g02492 Csa-Chr4:24802701 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02491 K16296 - csv:101207623 965.296