Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g02492 | ATGCTTCTTTCCTTCCGCTTCTCTCTTTCCATTCTTTTTCTTCTCCATGTATTCTCCGCCCACGCTAATTCTCACTGGACGGTGAACTCTTTGCCGGGATTCTCAGGGGAGCTTCCTTTCTCGCTGGAAACAGGATACGTAGGAGTGGGGGATTGGGAGGAATTTCAATTGTTTTATTATTTCATAAAATCATATTCAAATCCCAAAACGGATCCTCTCGTTCTGTGGCTCACCGGAGGCCCTGGTTGCTCTGCTCTCTCTGGTCTCGCCTTTGAAAGTGGTCCAATCAATTTTGAGGGAGAGCTGAAGGAGGGAAGCCTACCTCGAGTACTCATAAACCCTTACTCATGGACACAGAACACCAGTATACTATATCTAGATTTACCCGTTGGCACGGGTTTTTCGTATGCCAAAACCTCAAAAGATCATATATCAGGAGATCACGAACAAGTTCAACATTCTCTTCAATTCTTGAAAAAGTGGTTCGATGATCATCCAGAATTTATATCAAATCCATTTTATATTTCTGGAAATTCTTATTCGGGTATGATTGTTCCAATGGTTGCTTTAGCAATTTTAGAAGGAACTTACAAACACATTTTTTCATTTATAAATTTCCAGGGATACATATTGGGGAATCCCATCACTATTCCTCATGCAAATGAAAATTGTCAAATTCCATTTGCTCATAATATGGCCCTCATCTCAGATGAATTGTATCAGTCGTTGGAAGCTAGTTGTCAAGGAGAATATGTAAACATTGATCCTAACAACGTGGAGTGCTTAAAACATTATGATACATTTACAAAGTGTACTTCTGTAGTTAGAGACTCGTGTATTTTATGGTCCAAATGTTCATCTTTAAAAGAACCACAAACAAAGTCTGGACAAAGAAGATCTCTGATCAACAGCATTTTTGTAGGCCAAAGATGTCGTGAACATGATGCCATACTTGCCTACTATTGGGCCAACAATGACGAAGTTCAAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATTAGATGTCGTGGAAAAGAATATTACAATTTTGAGATGACCAGTGTTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGCTATCGATCATTAATCTATAGTGGAGATCATGATATGGTAGTGCCGCATATGGAAACTCATGCATGGATTAAAGCTTTAAATTATTCTATAGTAGATGATTGGAGGCCTTGGTTCATCGAGGATGAAGTTGGCGGATACACCAGAAGTTTTGCAAATAATATGACATTTGTAACAGTCAAAGGTGGAGGACATACACCAGAATATTTACGAGAAGAATCCAGCATAGTTTTTAAGAGATGGATAGTGGGAGAATGGTTATGA | 1368 | 38.89 | MLLSFRFSLSILFLLHVFSAHANSHWTVNSLPGFSGELPFSLETGYVGVGDWEEFQLFYYFIKSYSNPKTDPLVLWLTGGPGCSALSGLAFESGPINFEGELKEGSLPRVLINPYSWTQNTSILYLDLPVGTGFSYAKTSKDHISGDHEQVQHSLQFLKKWFDDHPEFISNPFYISGNSYSGMIVPMVALAILEGTYKHIFSFINFQGYILGNPITIPHANENCQIPFAHNMALISDELYQSLEASCQGEYVNIDPNNVECLKHYDTFTKCTSVVRDSCILWSKCSSLKEPQTKSGQRRSLINSIFVGQRCREHDAILAYYWANNDEVQKALHIHEGSIGEWIRCRGKEYYNFEMTSVFPYHVNLSSKGYRSLIYSGDHDMVVPHMETHAWIKALNYSIVDDWRPWFIEDEVGGYTRSFANNMTFVTVKGGGHTPEYLREESSIVFKRWIVGEWL* | 456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24802701 | 24805504 | - | CsaV3_4G035180.1 | Csa04g02492 | 528102 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g02492 | 455 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 14 | 453 | IPR001563 | GO:0004185|GO:0006508 | |
Csa04g02492 | 455 | SUPERFAMILY | alpha/beta-Hydrolases | 27 | 452 | IPR029058 | - | |
Csa04g02492 | 455 | Pfam | Serine carboxypeptidase | 32 | 451 | IPR001563 | GO:0004185|GO:0006508 | |
Csa04g02492 | 455 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 14 | 453 | - | - | |
Csa04g02492 | 455 | Gene3D | alpha/beta hydrolase | 21 | 454 | IPR029058 | - | |
Csa04g02492 | 455 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 113 | 125 | IPR001563 | GO:0004185|GO:0006508 | |
Csa04g02492 | 455 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 126 | 136 | IPR001563 | GO:0004185|GO:0006508 | |
Csa04g02492 | 455 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 161 | 186 | IPR001563 | GO:0004185|GO:0006508 | |
Csa04g02492 | 455 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 423 | 436 | IPR001563 | GO:0004185|GO:0006508 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g02489 | Csa-Chr4:24787778 | Csa04g02492 | Csa-Chr4:24802701 | 5.93E-95 | dispersed | |
Csa04g02490 | Csa-Chr4:24789162 | Csa04g02492 | Csa-Chr4:24802701 | 4.35E-119 | dispersed | |
Csa04g02492 | Csa-Chr4:24802701 | Csa07g01623 | Csa-Chr7:16753143 | 1.59E-112 | dispersed | |
Csa04g02491 | Csa-Chr4:24796951 | Csa04g02492 | Csa-Chr4:24802701 | 0 | tandem | |
Csa04g02492 | Csa-Chr4:24802701 | Csa04g02493 | Csa-Chr4:24807676 | 6.79E-07 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g02492 | K16296 | - | csv:101210918 | 951.429 |