Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02492 ATGCTTCTTTCCTTCCGCTTCTCTCTTTCCATTCTTTTTCTTCTCCATGTATTCTCCGCCCACGCTAATTCTCACTGGACGGTGAACTCTTTGCCGGGATTCTCAGGGGAGCTTCCTTTCTCGCTGGAAACAGGATACGTAGGAGTGGGGGATTGGGAGGAATTTCAATTGTTTTATTATTTCATAAAATCATATTCAAATCCCAAAACGGATCCTCTCGTTCTGTGGCTCACCGGAGGCCCTGGTTGCTCTGCTCTCTCTGGTCTCGCCTTTGAAAGTGGTCCAATCAATTTTGAGGGAGAGCTGAAGGAGGGAAGCCTACCTCGAGTACTCATAAACCCTTACTCATGGACACAGAACACCAGTATACTATATCTAGATTTACCCGTTGGCACGGGTTTTTCGTATGCCAAAACCTCAAAAGATCATATATCAGGAGATCACGAACAAGTTCAACATTCTCTTCAATTCTTGAAAAAGTGGTTCGATGATCATCCAGAATTTATATCAAATCCATTTTATATTTCTGGAAATTCTTATTCGGGTATGATTGTTCCAATGGTTGCTTTAGCAATTTTAGAAGGAACTTACAAACACATTTTTTCATTTATAAATTTCCAGGGATACATATTGGGGAATCCCATCACTATTCCTCATGCAAATGAAAATTGTCAAATTCCATTTGCTCATAATATGGCCCTCATCTCAGATGAATTGTATCAGTCGTTGGAAGCTAGTTGTCAAGGAGAATATGTAAACATTGATCCTAACAACGTGGAGTGCTTAAAACATTATGATACATTTACAAAGTGTACTTCTGTAGTTAGAGACTCGTGTATTTTATGGTCCAAATGTTCATCTTTAAAAGAACCACAAACAAAGTCTGGACAAAGAAGATCTCTGATCAACAGCATTTTTGTAGGCCAAAGATGTCGTGAACATGATGCCATACTTGCCTACTATTGGGCCAACAATGACGAAGTTCAAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATTAGATGTCGTGGAAAAGAATATTACAATTTTGAGATGACCAGTGTTTTTCCTTATCACGTGAACCTTAGTTCTAAAGGCTATCGATCATTAATCTATAGTGGAGATCATGATATGGTAGTGCCGCATATGGAAACTCATGCATGGATTAAAGCTTTAAATTATTCTATAGTAGATGATTGGAGGCCTTGGTTCATCGAGGATGAAGTTGGCGGATACACCAGAAGTTTTGCAAATAATATGACATTTGTAACAGTCAAAGGTGGAGGACATACACCAGAATATTTACGAGAAGAATCCAGCATAGTTTTTAAGAGATGGATAGTGGGAGAATGGTTATGA 1368 38.89 MLLSFRFSLSILFLLHVFSAHANSHWTVNSLPGFSGELPFSLETGYVGVGDWEEFQLFYYFIKSYSNPKTDPLVLWLTGGPGCSALSGLAFESGPINFEGELKEGSLPRVLINPYSWTQNTSILYLDLPVGTGFSYAKTSKDHISGDHEQVQHSLQFLKKWFDDHPEFISNPFYISGNSYSGMIVPMVALAILEGTYKHIFSFINFQGYILGNPITIPHANENCQIPFAHNMALISDELYQSLEASCQGEYVNIDPNNVECLKHYDTFTKCTSVVRDSCILWSKCSSLKEPQTKSGQRRSLINSIFVGQRCREHDAILAYYWANNDEVQKALHIHEGSIGEWIRCRGKEYYNFEMTSVFPYHVNLSSKGYRSLIYSGDHDMVVPHMETHAWIKALNYSIVDDWRPWFIEDEVGGYTRSFANNMTFVTVKGGGHTPEYLREESSIVFKRWIVGEWL* 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24802701 24805504 - CsaV3_4G035180.1 Csa04g02492 528102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02492 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 453 IPR001563 GO:0004185|GO:0006508
Csa04g02492 455 SUPERFAMILY alpha/beta-Hydrolases 27 452 IPR029058 -
Csa04g02492 455 Pfam Serine carboxypeptidase 32 451 IPR001563 GO:0004185|GO:0006508
Csa04g02492 455 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 14 453 - -
Csa04g02492 455 Gene3D alpha/beta hydrolase 21 454 IPR029058 -
Csa04g02492 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Csa04g02492 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Csa04g02492 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Csa04g02492 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02489 Csa-Chr4:24787778 Csa04g02492 Csa-Chr4:24802701 5.93E-95 dispersed
Csa04g02490 Csa-Chr4:24789162 Csa04g02492 Csa-Chr4:24802701 4.35E-119 dispersed
Csa04g02492 Csa-Chr4:24802701 Csa07g01623 Csa-Chr7:16753143 1.59E-112 dispersed
Csa04g02491 Csa-Chr4:24796951 Csa04g02492 Csa-Chr4:24802701 0 tandem
Csa04g02492 Csa-Chr4:24802701 Csa04g02493 Csa-Chr4:24807676 6.79E-07 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02492 K16296 - csv:101210918 951.429