Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g02610 | ATGGCGGAAACGGCGTCGTATATCAACACATGCAAGTCGTTTTTAGTTTTTCTGGCTTTGTCTTTTCCGGCGACAACACTGGCATTGTCCTTCGGATTTTACGCCGCCACGTGTCCCGCCGCCGAGTTAATGGTTAGGAACACCGTCAGATCGGCTTCCTCCGTTGACCCCACCGTCCCCGGCAAGCTCCTCCGGTTGCTATTCCATGACTGTTTTGTTGAGGGATGTGATGCTTCTGTATTGGTGGAAGGAAATGGAACGGAACGAAGCGATCCGGCAAACAAGTCACTTGGAGGATTCGAAGTAATCGATTCAGCTAAGAGAACTTTAGAAATTTTTTGTCCCGGAACTGTTTCATGTGCCGATATTGTCGTTTTAGCCGCCAGAGATGCAGTTGAATTCACCGGTGGGCCCTCCGTTCAAGTCCCGACCGGCCGAAGAGACGGAAAGATATCAGCGGCGTCAAACGTCCGGCCAAACATCGCCGACACAAGCTTTTCAGTCAACCAGATGATGAATCTCTTCTCATCAAAAGGACTGTCGGTGGACGATCTCGTCATCCTCTCCGGTGCCCACACCATCGGAACCTCCCACTGCAGCGCCTTCAGCGACCGCTTCCGACGAAACCCAAATGGCCAACTGACCCTCATCGACGCCTCTCTAGACGGGGCCTACGCCGACGAGCTCATGCGGCGGTGCCCTGCAGGCGCCTCCACTGCCGCCACCGTCGAAAACGATCCGGCTACGTCGTCTGTCTTTGACAATCAGTATTACAGAAACATTTTGTCACATAGAGGGCTGTTGCAGTCGGATTCCGTTCTGATCAGCGACGGCCGGACTAGAGCTCGGGTGGAGAGCTTCGCGAATGATGAGATTGGGTTCTTTGAAAACTGGGCCCAGTCGTTCTTGAAACTTAGTAGCGTTGGAGTTAAGAGTGGGGATGAAGGGGAAATTAGGTTGTCTTGTTCTACTCCTAATGTTTGA | 984 | 52.54 | MAETASYINTCKSFLVFLALSFPATTLALSFGFYAATCPAAELMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLVEGNGTERSDPANKSLGGFEVIDSAKRTLEIFCPGTVSCADIVVLAARDAVEFTGGPSVQVPTGRRDGKISAASNVRPNIADTSFSVNQMMNLFSSKGLSVDDLVILSGAHTIGTSHCSAFSDRFRRNPNGQLTLIDASLDGAYADELMRRCPAGASTAATVENDPATSSVFDNQYYRNILSHRGLLQSDSVLISDGRTRARVESFANDEIGFFENWAQSFLKLSSVGVKSGDEGEIRLSCSTPNV* | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25586011 | 25589218 | - | CsaV3_4G036360.1 | Csa04g02610 | 528220 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g02610 | 327 | Gene3D | - | 32 | 326 | - | - | |
Csa04g02610 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 28 | 326 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 29 | 326 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | Gene3D | Peroxidase, domain 2 | 162 | 305 | - | - | |
Csa04g02610 | 327 | PRINTS | Haem peroxidase superfamily signature | 60 | 74 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Haem peroxidase superfamily signature | 118 | 135 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Haem peroxidase superfamily signature | 136 | 148 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Haem peroxidase superfamily signature | 184 | 199 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PANTHER | PEROXIDASE 18-RELATED | 22 | 324 | - | - | |
Csa04g02610 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 184 | 194 | IPR019793 | - | |
Csa04g02610 | 327 | Pfam | Peroxidase | 45 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PANTHER | PEROXIDASE 25-RELATED | 22 | 324 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | CDD | secretory_peroxidase | 29 | 323 | IPR033905 | GO:0004601|GO:0042744 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 38 | 57 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 62 | 82 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 98 | 111 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 117 | 127 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 136 | 151 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 183 | 195 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa04g02610 | 327 | PRINTS | Plant peroxidase signature | 300 | 313 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g02610 | Csa-Chr4:25586011 | Csa03g01667 | Csa-Chr3:12492194 | 3.48E-83 | dispersed | |
Csa07g00093 | Csa-Chr7:874920 | Csa04g02610 | Csa-Chr4:25586011 | 4.02E-17 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g02610 | K00430 | K18328 | csv:101211842 | 645.966 |