Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02610 ATGGCGGAAACGGCGTCGTATATCAACACATGCAAGTCGTTTTTAGTTTTTCTGGCTTTGTCTTTTCCGGCGACAACACTGGCATTGTCCTTCGGATTTTACGCCGCCACGTGTCCCGCCGCCGAGTTAATGGTTAGGAACACCGTCAGATCGGCTTCCTCCGTTGACCCCACCGTCCCCGGCAAGCTCCTCCGGTTGCTATTCCATGACTGTTTTGTTGAGGGATGTGATGCTTCTGTATTGGTGGAAGGAAATGGAACGGAACGAAGCGATCCGGCAAACAAGTCACTTGGAGGATTCGAAGTAATCGATTCAGCTAAGAGAACTTTAGAAATTTTTTGTCCCGGAACTGTTTCATGTGCCGATATTGTCGTTTTAGCCGCCAGAGATGCAGTTGAATTCACCGGTGGGCCCTCCGTTCAAGTCCCGACCGGCCGAAGAGACGGAAAGATATCAGCGGCGTCAAACGTCCGGCCAAACATCGCCGACACAAGCTTTTCAGTCAACCAGATGATGAATCTCTTCTCATCAAAAGGACTGTCGGTGGACGATCTCGTCATCCTCTCCGGTGCCCACACCATCGGAACCTCCCACTGCAGCGCCTTCAGCGACCGCTTCCGACGAAACCCAAATGGCCAACTGACCCTCATCGACGCCTCTCTAGACGGGGCCTACGCCGACGAGCTCATGCGGCGGTGCCCTGCAGGCGCCTCCACTGCCGCCACCGTCGAAAACGATCCGGCTACGTCGTCTGTCTTTGACAATCAGTATTACAGAAACATTTTGTCACATAGAGGGCTGTTGCAGTCGGATTCCGTTCTGATCAGCGACGGCCGGACTAGAGCTCGGGTGGAGAGCTTCGCGAATGATGAGATTGGGTTCTTTGAAAACTGGGCCCAGTCGTTCTTGAAACTTAGTAGCGTTGGAGTTAAGAGTGGGGATGAAGGGGAAATTAGGTTGTCTTGTTCTACTCCTAATGTTTGA 984 52.54 MAETASYINTCKSFLVFLALSFPATTLALSFGFYAATCPAAELMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLVEGNGTERSDPANKSLGGFEVIDSAKRTLEIFCPGTVSCADIVVLAARDAVEFTGGPSVQVPTGRRDGKISAASNVRPNIADTSFSVNQMMNLFSSKGLSVDDLVILSGAHTIGTSHCSAFSDRFRRNPNGQLTLIDASLDGAYADELMRRCPAGASTAATVENDPATSSVFDNQYYRNILSHRGLLQSDSVLISDGRTRARVESFANDEIGFFENWAQSFLKLSSVGVKSGDEGEIRLSCSTPNV* 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25586011 25589218 - CsaV3_4G036360.1 Csa04g02610 528220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02610 327 Gene3D - 32 326 - -
Csa04g02610 327 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 SUPERFAMILY Heme-dependent peroxidases 29 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 Gene3D Peroxidase, domain 2 162 305 - -
Csa04g02610 327 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PANTHER PEROXIDASE 18-RELATED 22 324 - -
Csa04g02610 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Csa04g02610 327 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PANTHER PEROXIDASE 25-RELATED 22 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 CDD secretory_peroxidase 29 323 IPR033905 GO:0004601|GO:0042744
Csa04g02610 327 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa04g02610 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02610 Csa-Chr4:25586011 Csa03g01667 Csa-Chr3:12492194 3.48E-83 dispersed
Csa07g00093 Csa-Chr7:874920 Csa04g02610 Csa-Chr4:25586011 4.02E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02610 K00430 K18328 csv:101211842 645.966