Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02634 ATGGCCTTATTTCGCAAATTCTTTTATCGGAAGCCACCCGACGGGCTTTTAGAGATATCCGAAAGGGTTTATGTTTTCGACTGCTGCTTTACAACGGAGGTGTTGGAAGAAGACGAATACAAGGTCTATATTGGAGGGATTGTGGGGCAACTTCGTGAGAGTTTGACAGACGCCTCATTCATGGTGTTCAATTTCCGAGAAGGGGAGCATCATAGCCTCATTACTAATATATTATCTGTATATGATATGACTGTCATGGACTATCCTAGACAATATGAAGGCTGCCCTTTACTCACCATGGAGATGATCCACCATTTCTTGAGATCCAGTGAAAGCTGGCTCTCACTTGGGCAACAGAATGTACTTTTAATGCACTGTGAAAGAGGGGGGTGGCCAGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAGTATGCAGGGGAGCAGAAAACTTTGGATATGATTTACAAGCAAGCACCTAGAGAACTTTTGCAGTTGATGTCACCACTTAATCCATTGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGAAGAAATGTGGGCTCTGAATGGCCTCCTCTTGACAGAGCCCTTACACTAGACTGCATAATTATTAGATGTATTCCTAATATGGATGGGGAGGGTGGTTGCCGCCCAATATTTAGGATATATGGACAGGATCCGTTTATGGCTGCTGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGTCAGTATAAGCAGGTAGATTGTGAACTAGTTAAAATTGATATCCATTGCCATATCCAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGAAAGGGAGGAAATGATGTTCCGAGTTATGTTTAACACAGCATTTATCAGGTCAAATATTTTGATGCTTAACCGTGATGACATTGATATTTTATGGCATGCAAAGGATCAATTTCCAAAGGATTTCAGAGCAGAGGTTCTTTTCTCAGAGATGGATTCTTCCGCTTCACTTATTTCAATTGAATTGCCAAATATTGAAGAGAAAGATGGCCTTCCAATCGAAGCCTTTGCTCGAGTTCAAGAGATCTTTAGCAATGTGGACTGGCTAAGCCCAAAGGCAGATGCAGCTCTTAACGTGCTTCAGAAAATAACAGCTTCAAATTTACTTCAAGAGAAGCTGCTTAGTTCTGGCTCTTTAGACAGAAGGCAATTACTTGACTTATCTCTTGAAAAACTAATCTTGGAATCAGAGACATCTGAAGAAAATATTAGAAGTCCCCGATTGAAGATACAGACAAAGTCTAAGCTTTCTTCCGAATTATCTAAAGCTGCAAGTTCAGTGATATCAAAACTTGAACCCTCAGAATTGCAGGTTGCTCTCCAACTACCACCTCAGTCTAAAATAATCACTCAACGAATACCTCAACCGTCATTGTCTACGCCAGTCTCCTTCCGTAGTTCTATGCAAGGTTCACCTCGCCCTATACTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTACTACATGATCATTCCGATTTTATTGGTAAAGAACTTATACATTCAGGGACAACATCTTCACCATCATCTGCTCGGTTGAGTCCAACTGCTCTAGATTCACCTAGAGATATTCAACGTAGTAACCTTCCTATTTCTCCTCTCCCTCTAGTATTAGACGCAAGATCTTCATTAGAAAATTCTTTGACCACCGCATCAACTACAACCATTCCTGATCCACTGCCCCTTCACCAACTTTCTTTGAAACCTATTAAATATTTAGTTTCTCAACCGACTCAAACCACATCACAAGTGAGAAGTCAATTATCACCATCTTCATTACAACCAACTTCTGCCTCTTATATTGGGGAATCCCCACCCTCTCTCAATGATAGCGAAGCTTCAATATCATCTTCCTCTCCTTTGTCAAGATCATCTCCATCTTCTTGTACTAAAGAATTAATTTCCGTTTCCACTCCTCCTCCTCCTCCTCCCCTCCCCCATTTTGATTCACCTTCAGCTTTAGCAACATCTCCACCTTCTAGTAGGACGAATGGCACTAGTGTTGTCTCGCCGACATCAGTGCCTCCGCCCCAACCTCCACCTCCACCTCCTTCATGGAAGGACTCTACGAACACATTCATGCATGTCCCCCCAGCTCCACCTCCAGCCCCACCCTTGCCTCCATCTTCTTTCAGTTCTACATTTACTTGTGGTTCTAGTATCACGCCTTTAGGGCCACCACCACCGCCACCACCTCCTTCAAGTCATGCACCACAAGATTTTGCCACAGTAGTTAGGACCTTGATGAATGCATCTGGCCCTCCACCTCCCCCACCTCCCTCGTTACATTCATCTCTAGGTTCTAATACTGTATCTTCAGTGCCGCCCCCGCCACCCCCTCCTAGTCTTGCAGTAAATGTTGCAACAACCGTTAACTTGACACATGTCAGCCCCCCTCCTCCTCCTCCTCCACCATTAGCAAATTCTGGACCCACCTTATGTCCAGGTGTTGCAACGTCAGCTCCGCCTGCTCCACCTCCTCCAGGTTTCTCAATGGAAGGTTCTGCAACACATGCTCCACCTGCACCCCCTCCTCCAGGTCTCAGCGGTAATAAACTCTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCGTTAATAACAGCAACATACCTTCTGTTCCTGGACCACCTTCCAGTGCTCTATTCAATGCAAAGGGACGTGGCCTTGGACGTATGAACTCCAAAAACCAGTCTCAACCTAAAAGATCCAATCTAAAGCCTTATCACTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTATGGGCAGAGACACAAAAGACCGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCAGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAGACTCTGGAGGTTCGGGAAATTCAAATCGCCGAGCCTCAGGGCCAAAATCAGATAAAGTTCATTTGATTGAACTTCGCCGGGCCTATAATTGTGAAATTATGCTTTCTAAAGTTAAGATTCCTTTGCCTGACATGATGTGTTCAGTCCTTGCATTGGATGACTCGGCATTAGATGTGGATCAGGTTGACAACCTAATCAAGTTTTGTCCAACAAAGGAAGAAATGGAATTACTAAAGGGGTACGGTGGGGATAAGGACAACTTGGGAAAATGTGAACAATTCTTTTCTGAATTAATGAAAGTCCCACGAGTAGAGTCCAAGCTAAGGGTATTTTCTTTCAAGATACAATTCCGATTGCAGGCCTCTGACCTTAGAAATAGTCTGAATACTATTAATTCGGCATCTGAAGAGATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACTATCCTTTCACTGGGTAATGCTTTGAACCATGGAACGGCTAGAGGTTCCGCTATTGGATTTCGGCTTGATAGTCTTCTCAAACTCACTGATACACGAGCCAGAAACAATAAGATGACTCTCATGCATTATCTATGTAAGGTTCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTTCCGAAGGACCTTGTGAGTTTGGAAGCTTCTACGAAGATACAACTGAAGTACTTGGCAGAAGAAATGCAAGCCATAAGCAAAGGGCTTGAGAAGGTTGTCCAGGAATTGGCCAATTCAGAGAATGATGGACCCATTTCTGAAATTTTCTGCCGGACTTTAAAAGGCTTCCTTTCTCATGCCGAGGCAGAAGTGAGGTCTCTTGCCTCTCTTTATTCTAATGTGGGTAGAAATGCCGATGCACTGGCTCTTTATTTCGGCGAAGATCCTGCACGTTGCCCTTTTGAGCAAGTTGTTTCTACACTGTTCAATTTTGTGAGGATGTTTGCGCGAGCGCACGAAGAAAACTGTAAGCAGCTTGAATATGAAAAGAAAAAAGCACAGAAAGAAGCGGCAGAAAGGGAGAAGTTGAAGCTCGGTACTGCGAAAAAGGAGTCAGGATTCTTAATGCAGACTCAAATCTAG 4041 43.55 MALFRKFFYRKPPDGLLEISERVYVFDCCFTTEVLEEDEYKVYIGGIVGQLRESLTDASFMVFNFREGEHHSLITNILSVYDMTVMDYPRQYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGSEWPPLDRALTLDCIIIRCIPNMDGEGGCRPIFRIYGQDPFMAADRTSKVLFSTPKKSKLVRQYKQVDCELVKIDIHCHIQGDVVLECISLDNDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWHAKDQFPKDFRAEVLFSEMDSSASLISIELPNIEEKDGLPIEAFARVQEIFSNVDWLSPKADAALNVLQKITASNLLQEKLLSSGSLDRRQLLDLSLEKLILESETSEENIRSPRLKIQTKSKLSSELSKAASSVISKLEPSELQVALQLPPQSKIITQRIPQPSLSTPVSFRSSMQGSPRPILRYHSAPSALGITALLHDHSDFIGKELIHSGTTSSPSSARLSPTALDSPRDIQRSNLPISPLPLVLDARSSLENSLTTASTTTIPDPLPLHQLSLKPIKYLVSQPTQTTSQVRSQLSPSSLQPTSASYIGESPPSLNDSEASISSSSPLSRSSPSSCTKELISVSTPPPPPPLPHFDSPSALATSPPSSRTNGTSVVSPTSVPPPQPPPPPPSWKDSTNTFMHVPPAPPPAPPLPPSSFSSTFTCGSSITPLGPPPPPPPPSSHAPQDFATVVRTLMNASGPPPPPPPSLHSSLGSNTVSSVPPPPPPPSLAVNVATTVNLTHVSPPPPPPPPLANSGPTLCPGVATSAPPAPPPPGFSMEGSATHAPPAPPPPGLSGNKLSNVNGTSSQSHVGVNNSNIPSVPGPPSSALFNAKGRGLGRMNSKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKTDEASKAPEFDMSELESLFSAAAPNSDSGGSGNSNRRASGPKSDKVHLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDDSALDVDQVDNLIKFCPTKEEMELLKGYGGDKDNLGKCEQFFSELMKVPRVESKLRVFSFKIQFRLQASDLRNSLNTINSASEEIRSSVKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGPISEIFCRTLKGFLSHAEAEVRSLASLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFARAHEENCKQLEYEKKKAQKEAAEREKLKLGTAKKESGFLMQTQI* 1347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25716565 25725470 + CsaV3_4G036600.1 Csa04g02634 528244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02634 1346 MobiDBLite consensus disorder prediction 981 1002 - -
Csa04g02634 1346 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Csa04g02634 1346 ProSiteProfiles SERTA domain profile. 404 451 IPR009263 -
Csa04g02634 1346 Gene3D Formin, FH2 domain 920 1312 IPR042201 -
Csa04g02634 1346 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 825 840 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 702 717 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 752 767 - -
Csa04g02634 1346 ProSiteProfiles Formin homology-2 (FH2) domain profile. 927 1327 IPR015425 -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 981 998 - -
Csa04g02634 1346 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 611 665 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 611 940 - -
Csa04g02634 1346 SUPERFAMILY Formin homology 2 domain (FH2 domain) 853 1321 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 880 908 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 922 936 - -
Csa04g02634 1346 Gene3D - 196 341 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 530 556 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 725 739 - -
Csa04g02634 1346 MobiDBLite consensus disorder prediction 683 701 - -
Csa04g02634 1346 SMART it6_source 665 1346 IPR015425 -
Csa04g02634 1346 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Csa04g02634 1346 PANTHER FORMIN-J 784 1338 - -
Csa04g02634 1346 PANTHER FORMIN-J 1 765 - -
Csa04g02634 1346 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Csa04g02634 1346 Pfam Formin Homology 2 Domain 929 1301 IPR015425 -
Csa04g02634 1346 Coils Coil 1302 1329 - -
Csa04g02634 1346 SMART PTEN_C2_2 197 337 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00260 Csa-Chr1:1613373 Csa04g02634 Csa-Chr4:25716565 0 dispersed
Csa01g00571 Csa-Chr1:3670613 Csa04g02634 Csa-Chr4:25716565 3.35E-134 dispersed
Csa01g01729 Csa-Chr1:13913836 Csa04g02634 Csa-Chr4:25716565 3.47E-67 dispersed
Csa01g01730 Csa-Chr1:13925596 Csa04g02634 Csa-Chr4:25716565 0 dispersed
Csa04g02634 Csa-Chr4:25716565 Csa02g01413 Csa-Chr2:13503958 9.03E-30 dispersed
Csa06g02964 Csa-Chr6:25642802 Csa04g02634 Csa-Chr4:25716565 1.76E-07 dispersed
Csa07g00734 Csa-Chr7:5208981 Csa04g02634 Csa-Chr4:25716565 7.44E-08 dispersed
Csa03g02724 Csa-Chr3:26029083 Csa04g02634 Csa-Chr4:25716565 1.42E-151 transposed
Csa01g01880 Csa-Chr1:15792317 Csa04g02634 Csa-Chr4:25716565 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02634 - - csv:101214019 2146.7