Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g02735 | ATGGGGCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTATACCATTTCAAAGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCTTACGATCTCTTCAGCATCTCTCCCATTATGACCATCCTCGGACGTGTCTACTATCAGGACAAACAATACGAGATTCCCGCCACTGTCAAATCCGCTATGCTTGCGGTGGCCCTTCTGGGAACGGCGATGGGTCAACTGGTGTTTGGCATACTCGGAGATAGAGTGGGACGGCGGAGAGTGTACGGACTGGCATTGGCGCTGATGGTGGCGAGTTCAATTGGGTGTGGGTTTTCAATCTGTACCACAAGAAGCTGTGTCCTTGTGAGCCTTGGATTTTTCAGGTTCCTTCTAGGACTGGGAATTGGCGGAGATTACCCATTGTCGGCGACCATTATGTCGGAGTTCGCCAACAAGAAAACGCGTGGAGCTTTCATAGCGGCGGTGTTCTCGATGCAGGGATTTGGGATTTTGGCCAGTGCCACGGTGACCATGATCGTGTGCTCCATATTCGATCGAGCCTCGAATTACCCAACAGGTAAACGTACGCCGATGGGGGCTGATATTGCTTGGAGGCTGATCCTCATGCTGGGCGCTGTTCCGGCGGCCATGACTTATTACTGGCGAATGATGATGCCGGAAACTGCCAGATACACAGCTTTGGTGGAGCGGAATGTGGCACAGGCAGCAAAGGATATGGAGAAAGTGTTGGATGTTTCTTTGGCTGATATCACGGAAGATAGCCCCATGTCCCCTTCACCTCCAAATTTCCATTTCTTTTCTAACCAATTTCTTCGTCGCCATGGCCGAGACCTCTTTTCATGTGCCGCCTCTTGGTTCCTGGTCGACGTTGTGTTCTACAGCAGCAATCTCTTCCAGTCCAAAATCTACACCCAATTCCTTCCCCACGACCAAAATTCCACCAATAACGTTTATCATCAAGCCTTAAATGAGGCCAGACTCCAAGCCATCGTAGCTGTCTGTTCCACCATTCCTGGCTACTGGATCTCCGTCTTCTTCATCGATCGCCTTGGTCGAGTCACTATCCAAATCATAGGTTTTCTGTTCATGGCTATTGGTTACGTTGTCATCGCCATCCCCTACAACTCTTTCTGGGAATCTGATAAACATAAATACGGTTTCATGCTATTTTATTGCCTCACCTTCTTCTTCTCAAATTTCGGCCCTAACACCACCACTTTTATTCTCCCCGCGGAGCTGTTCCCGGCTAGATTTAGGTCCACCTGCCATGGAATCTCTGGCGCCTCTGGAAAAATTGGTGCCATCATTGGAGCCGTGGGGTTCCTTTGGGCCTCGCACGATCGAGAGGACAACGGAATTGGGATGAAGGCTTCGTTGATGTTGCTTGGTGGGGTGAGTTTAGCGGGAGTGGCAGTCACGTATTTCTTCACTAGAGAGACCAATGGAAGGTCGTTGGAAGAGAATGAGAATGAAGATGAATATGTTGGGATTTTCTTTCTTAGATCATGCTTTAACTTACACCGTACTACCGCTCATGCTGCTACTGCTCAACGCGATCAAATGTCATCACGTTCGACCTCCAACTCCATTCCAAGTACTACACCATTTCATCGTTAG | 1635 | 49.6 | MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSISPIMTILGRVYYQDKQYEIPATVKSAMLAVALLGTAMGQLVFGILGDRVGRRRVYGLALALMVASSIGCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASATVTMIVCSIFDRASNYPTGKRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLADITEDSPMSPSPPNFHFFSNQFLRRHGRDLFSCAASWFLVDVVFYSSNLFQSKIYTQFLPHDQNSTNNVYHQALNEARLQAIVAVCSTIPGYWISVFFIDRLGRVTIQIIGFLFMAIGYVVIAIPYNSFWESDKHKYGFMLFYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGASGKIGAIIGAVGFLWASHDREDNGIGMKASLMLLGGVSLAGVAVTYFFTRETNGRSLEENENEDEYVGIFFLRSCFNLHRTTAHAATAQRDQMSSRSTSNSIPSTTPFHR* | 545 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26288388 | 26291513 | - | CsaV3_4G037610.1 | Csa04g02735 | 528345 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g02735 | 544 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED | 1 | 499 | - | - | |
Csa04g02735 | 544 | MobiDBLite | consensus disorder prediction | 521 | 544 | - | - | |
Csa04g02735 | 544 | Pfam | Sugar (and other) transporter | 23 | 495 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Csa04g02735 | 544 | SUPERFAMILY | MFS general substrate transporter | 9 | 497 | IPR036259 | - | |
Csa04g02735 | 544 | ProSitePatterns | Sugar transport proteins signature 2. | 129 | 154 | IPR005829 | GO:0016021|GO:0022857|GO:0055085 | |
Csa04g02735 | 544 | Gene3D | MFS general substrate transporter like domains | 17 | 503 | IPR036259 | - | |
Csa04g02735 | 544 | CDD | MFS_PhT | 22 | 486 | - | - | |
Csa04g02735 | 544 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 487 | IPR020846 | GO:0022857 | |
Csa04g02735 | 544 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 1 | 499 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g02735 | Csa-Chr4:26288388 | Csa06g00361 | Csa-Chr6:2938148 | 6.79E-173 | dispersed | |
Csa04g02735 | Csa-Chr4:26288388 | Csa03g01213 | Csa-Chr3:9360966 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g02735 | K08176 | - | csv:101218554 | 1036.94 |