Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02735 ATGGGGCTCAAAGTGCTTTCCGCTCTCGACACTGCCAAAACCCAATTATACCATTTCAAAGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCTTACGATCTCTTCAGCATCTCTCCCATTATGACCATCCTCGGACGTGTCTACTATCAGGACAAACAATACGAGATTCCCGCCACTGTCAAATCCGCTATGCTTGCGGTGGCCCTTCTGGGAACGGCGATGGGTCAACTGGTGTTTGGCATACTCGGAGATAGAGTGGGACGGCGGAGAGTGTACGGACTGGCATTGGCGCTGATGGTGGCGAGTTCAATTGGGTGTGGGTTTTCAATCTGTACCACAAGAAGCTGTGTCCTTGTGAGCCTTGGATTTTTCAGGTTCCTTCTAGGACTGGGAATTGGCGGAGATTACCCATTGTCGGCGACCATTATGTCGGAGTTCGCCAACAAGAAAACGCGTGGAGCTTTCATAGCGGCGGTGTTCTCGATGCAGGGATTTGGGATTTTGGCCAGTGCCACGGTGACCATGATCGTGTGCTCCATATTCGATCGAGCCTCGAATTACCCAACAGGTAAACGTACGCCGATGGGGGCTGATATTGCTTGGAGGCTGATCCTCATGCTGGGCGCTGTTCCGGCGGCCATGACTTATTACTGGCGAATGATGATGCCGGAAACTGCCAGATACACAGCTTTGGTGGAGCGGAATGTGGCACAGGCAGCAAAGGATATGGAGAAAGTGTTGGATGTTTCTTTGGCTGATATCACGGAAGATAGCCCCATGTCCCCTTCACCTCCAAATTTCCATTTCTTTTCTAACCAATTTCTTCGTCGCCATGGCCGAGACCTCTTTTCATGTGCCGCCTCTTGGTTCCTGGTCGACGTTGTGTTCTACAGCAGCAATCTCTTCCAGTCCAAAATCTACACCCAATTCCTTCCCCACGACCAAAATTCCACCAATAACGTTTATCATCAAGCCTTAAATGAGGCCAGACTCCAAGCCATCGTAGCTGTCTGTTCCACCATTCCTGGCTACTGGATCTCCGTCTTCTTCATCGATCGCCTTGGTCGAGTCACTATCCAAATCATAGGTTTTCTGTTCATGGCTATTGGTTACGTTGTCATCGCCATCCCCTACAACTCTTTCTGGGAATCTGATAAACATAAATACGGTTTCATGCTATTTTATTGCCTCACCTTCTTCTTCTCAAATTTCGGCCCTAACACCACCACTTTTATTCTCCCCGCGGAGCTGTTCCCGGCTAGATTTAGGTCCACCTGCCATGGAATCTCTGGCGCCTCTGGAAAAATTGGTGCCATCATTGGAGCCGTGGGGTTCCTTTGGGCCTCGCACGATCGAGAGGACAACGGAATTGGGATGAAGGCTTCGTTGATGTTGCTTGGTGGGGTGAGTTTAGCGGGAGTGGCAGTCACGTATTTCTTCACTAGAGAGACCAATGGAAGGTCGTTGGAAGAGAATGAGAATGAAGATGAATATGTTGGGATTTTCTTTCTTAGATCATGCTTTAACTTACACCGTACTACCGCTCATGCTGCTACTGCTCAACGCGATCAAATGTCATCACGTTCGACCTCCAACTCCATTCCAAGTACTACACCATTTCATCGTTAG 1635 49.6 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSISPIMTILGRVYYQDKQYEIPATVKSAMLAVALLGTAMGQLVFGILGDRVGRRRVYGLALALMVASSIGCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASATVTMIVCSIFDRASNYPTGKRTPMGADIAWRLILMLGAVPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLADITEDSPMSPSPPNFHFFSNQFLRRHGRDLFSCAASWFLVDVVFYSSNLFQSKIYTQFLPHDQNSTNNVYHQALNEARLQAIVAVCSTIPGYWISVFFIDRLGRVTIQIIGFLFMAIGYVVIAIPYNSFWESDKHKYGFMLFYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGASGKIGAIIGAVGFLWASHDREDNGIGMKASLMLLGGVSLAGVAVTYFFTRETNGRSLEENENEDEYVGIFFLRSCFNLHRTTAHAATAQRDQMSSRSTSNSIPSTTPFHR* 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26288388 26291513 - CsaV3_4G037610.1 Csa04g02735 528345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02735 544 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 1 499 - -
Csa04g02735 544 MobiDBLite consensus disorder prediction 521 544 - -
Csa04g02735 544 Pfam Sugar (and other) transporter 23 495 IPR005828 GO:0016021|GO:0022857|GO:0055085
Csa04g02735 544 SUPERFAMILY MFS general substrate transporter 9 497 IPR036259 -
Csa04g02735 544 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Csa04g02735 544 Gene3D MFS general substrate transporter like domains 17 503 IPR036259 -
Csa04g02735 544 CDD MFS_PhT 22 486 - -
Csa04g02735 544 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 487 IPR020846 GO:0022857
Csa04g02735 544 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02735 Csa-Chr4:26288388 Csa06g00361 Csa-Chr6:2938148 6.79E-173 dispersed
Csa04g02735 Csa-Chr4:26288388 Csa03g01213 Csa-Chr3:9360966 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02735 K08176 - csv:101218554 1036.94