Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02741 ATGGCGATGAAGGGGAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGCTTCATGGGTGGTCAAGCTTCTGCTTTCCAGGGATTATATTGTCCACGGAACTGTCAGGGAACCCAGCGATGCTAAGTATGCTCACTTAACGAAATTTGATAAAGCCAACGAGAATTTGCAACTGTTTAAGGCTGATTTACTGGACTACCAGTCCCTGCGTACCGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCCACAACTTCATCAAACCCCGAGACAGAAGTGATTGGACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTTGAAGCAAAAATTAAGCGAGTCGTTGTCGTATCCTCAGTTGCTGCTGTGTTTTCCAATCCCAGTTGGCCTCGAAGTCGAGTAATGGATGAAAGTTGTTGGTCTGATACGGAGCACTGCAGAGCTTCTAAGGACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTTGACGTTGTGACTATTTGTCCTACCCTCGTTATCGGGCCAGTTTTGCAGCCAACAGTCAATGCCAGCACCTTGGTTCTTCTCAGAATTCTAAAAGAAGGGTCCGAGTCAATGGAGAACCGGCAACGGATGTTAGTAGATGTACGTGATGTAGCAGAGGCACTAATTCTTTTATATGAGAAGAGGGAGGCAGAAGGAAGGTACATTTGTACAGCGCATTCAATTGAGACACGGGAGCTGGTGGATGCACTGAAGAGCAAGTATCCTGATTATAGCTATCCAAAGAAGTTGAGTGAATGGAAAGCGGAGCCAATAAGTCTGAGCTCGGAGAAACTGCAAAGATTGGGTTGGAAGTATCGGCCATTGGAGGAGACGCTTGCAGATGCTGTCCAGAGTTTCAAAGACGCCGGCATGCTGGAGTGA 960 46.88 MAMKGKVCVTGAGGFIASWVVKLLLSRDYIVHGTVREPSDAKYAHLTKFDKANENLQLFKADLLDYQSLRTAIAGCDGVFHVACPVPSTTSSNPETEVIGPAVKGTHNVLEACVEAKIKRVVVVSSVAAVFSNPSWPRSRVMDESCWSDTEHCRASKDWYFLAKTKAESEALEFGRRCGLDVVTICPTLVIGPVLQPTVNASTLVLLRILKEGSESMENRQRMLVDVRDVAEALILLYEKREAEGRYICTAHSIETRELVDALKSKYPDYSYPKKLSEWKAEPISLSSEKLQRLGWKYRPLEETLADAVQSFKDAGMLE* 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26310401 26313106 + CsaV3_4G037670.1 Csa04g02741 528351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02741 319 Pfam NAD dependent epimerase/dehydratase family 7 243 IPR001509 -
Csa04g02741 319 Gene3D - 2 319 - -
Csa04g02741 319 CDD FR_SDR_e 7 296 - -
Csa04g02741 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 318 - -
Csa04g02741 319 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 2 318 - -
Csa04g02741 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 313 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g02741 Csa-Chr4:26310401 Csa07g02102 Csa-Chr7:20253590 5.59E-86 dispersed
Csa04g02741 Csa-Chr4:26310401 Csa03g02977 Csa-Chr3:28388659 1.07E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02741 - - csv:101208485 625.935