Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g02777 GATGGATGTTTGTGGGATACCAATGGGCACATTCTCTATTCTCCTCTTCCTTGCTGTGTCCCTTTGCCTGGATTTGAAAACATACGATTTTGTGTTTCACAATATGATGATAAAGACAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGCTGACAAAGAAGGTAACCCATCTAATATGCAAGTTCACCGATGGGACAAAGTTTGAGGCTGCTTGTAAATGGGGCAAACAATGCATTACAGCTGAATGGATATATGAGTGTGTCAGCCAGAGAAAGATTGTCTCTCTTGATTTGTATCGCCCAAAAGAAGTTAAAGCTCAAGACAGAGCGACAGGCTTATGCACTGTCAGCCAATTTCCTACTCAAGCTGCCCCAATGATAGCCAATGAAAGCATATCCCAGTTTCCTATCCATTCTGCCATTCCGAGAGACCAATCAGCTGGAACTAACAGTAGCTTTATAGGAGCAGCTGAACGAATAAGTTCTACGAAGAAAAGCGCAAGTTCTTTGACGAAGCCATAG 543 42.36 DGCLWDTNGHILYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKFEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQFPIHSAIPRDQSAGTNSSFIGAAERISSTKKSASSLTKP* 181
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 26755059 26755736 - CsaV3_4G038030.1 Csa04g02777 528387
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa04g02777 180 Gene3D BRCT domain 25 118 IPR036420 -
Csa04g02777 180 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 1 144 - -
Csa04g02777 180 Pfam twin BRCT domain 29 90 IPR001357 -
Csa04g02777 180 ProSiteProfiles BRCT domain profile. 25 108 IPR001357 -
Csa04g02777 180 CDD BRCT_TopBP1_rpt2_like 23 95 - -
Csa04g02777 180 SMART BRCT_7 22 98 IPR001357 -
Csa04g02777 180 SUPERFAMILY BRCT domain 21 109 IPR036420 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g01777 Csa-Chr4:17422137 Csa04g02777 Csa-Chr4:26755059 1.92E-125 dispersed
Csa04g02777 Csa-Chr4:26755059 Csa05g01376 Csa-Chr5:14556179 1.34E-24 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g02777 K10728 - csv:116403448 352.829