Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g00025 | ATGGCTTCGGATCCGAAGGTTCATCTTTTCGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGCTGGCTTGTTATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCATCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCCACAAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATTGATCCTTCAACGGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAATCACAGCACAACCCAGATAAGACACCTGAGTTTGTGATCAAGATCTTGCAGTTTTTGGTTCCCATTTTGATTTTGGGTTTGGCATTTGCTGTTCGACACTACACCAAGAATGAATAA | 405 | 40.99 | MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIFIPSQQSQHNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE* | 135 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 116589 | 118084 | - | CsaV3_5G000250.1 | Csa05g00025 | 528412 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g00025 | 134 | PANTHER | CYTOCHROME B5 | 1 | 132 | - | - | |
Csa05g00025 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 4 | 87 | IPR036400 | - | |
Csa05g00025 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Csa05g00025 | 134 | PANTHER | CYTOCHROME B5-LIKE | 1 | 132 | - | - | |
Csa05g00025 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 80 | IPR001199 | - | |
Csa05g00025 | 134 | Gene3D | - | 1 | 86 | IPR036400 | - | |
Csa05g00025 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037 | |
Csa05g00025 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Csa05g00025 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Csa05g00025 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Csa05g00025 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Csa05g00025 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g01102 | Csa-Chr3:8715763 | Csa05g00025 | Csa-Chr5:116589 | 3.66E-66 | dispersed | |
Csa03g02688 | Csa-Chr3:25692835 | Csa05g00025 | Csa-Chr5:116589 | 3.81E-57 | dispersed | |
Csa05g00025 | Csa-Chr5:116589 | Csa06g02086 | Csa-Chr6:18617774 | 1.35E-32 | dispersed | |
Csa06g00093 | Csa-Chr6:619820 | Csa05g00025 | Csa-Chr5:116589 | 2.80E-11 | transposed | |
Csa06g00897 | Csa-Chr6:7204282 | Csa05g00025 | Csa-Chr5:116589 | 5.48E-43 | transposed | |
Csa03g00777 | Csa-Chr3:6794685 | Csa05g00025 | Csa-Chr5:116589 | 1.44E-50 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g00025 | K23490 | - | csv:101207109 | 277.715 |