Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g00085 | ATGAAGTGGATTCTTTTCACAATTGTTTCTCTCTTCATTTCCTTTCTTGTGAAGCTATTTGTTTTCCCTTCTAGACATGGCCCTTACAAGCTCCCACCAGGCCCTTTCTCACTCCCTATTCTCACTTATAACTTCCTATGGCTCCGCCAGTCCCCTCTTGATCTTGAGTCTATGTTACGTACATTCATCAATAAATACGGCCCCATCCTCACCGTTCACGTCGGCCCTTCTCCTGCCATCATCATCTCCGACCGCTCCATCGCCCACAAGGCTCTCATTCAAAATGGTGCCATTTTCGCCGACCGCCCCCGGACCCTCTCCATCACCAGGATTACTACTTCTGCCAAATTTGATAACATCACTTCTGCTCCTTACGGCCCCATTTGGCGCCTTCTCCGCCGCAACCTCGCGATGGAGATGTTCCACCCTTCGCGTGTCAGGGCTTATTCTCGGGCTCGCAAGTGGGTTTTGGATATCCTTGTCGCTCGCCTTTCAGCTCAACCGGGATCCGAAGGTGGCGCGGTTGTTGTTGAGCATTTTCAGTATTCTATGTTTTGTTTGTTGGTTTTGATGTGTTTTGGAGATAAGTTGAATGAGACACAAATCTTGGAAATTCAACAAGTGCAGCGTGATATTCTTGTGAATCTTCAACGATTTATTTTTCTTAATTTATGGCCTAAGTTGATGAAGGTTTTGCTTAGAAATCGCTGGAAGGAATATTTACAAATCAAGAATAGACAACGAAAGGTTTTAGTCCCATTTATCAAGGCACGAGAGAAGATCAAAGAAGAAAGAGCAAAAAAGGAAGGGGAAGAAAATGAAGAATTTGTTGTATCGTATGTTGATACGCTACTCGATTTACAACTCATCGACGAGAAAAGAAAGCTTAACAACGAAGAAATAGTGAATTTATGTTCGGAGTTTCTCAACGCTGGGACGGACACTACCGCCACGTCATTGCAATGGATCATGGCGAACTTAGTGAAGTACCCAAAAATTCAAGAAAAACTATTCCAAGAGATCAAAGGAGTAAAGGAGTCTGCTAGTACCAAAAAAGATGGATTACGGGAGGAGGAGGAGGTGAAGGAAGAGGATCTAGGGAAACTTCCATATTTGAAAGCTGTGATTCTAGAAGGATTGAGAAGGCATCCACCAGGGCATTTCATGGTACCACATGCAGTGAAAGAAGATACAACTTTGGAGAATTATTTCATACCAAAGAATGGCATCGTGAGTTTCTTTGCAGTGGGAATGGGGTTGGATCCACAAGTATGGGAAGATCCGATGGCGTTTAAGCCGGAGCGGTTCATGAGTGACGATGGCGGCAAGGCGGAGTACTCGACGACGTTTGATATCACAGGAAACAAGGAGATTAAGATGATGCCATTTGGAGCAGGGAGGAGGATGTGTCCAGGGACTTCTTTGGCAATTCTTCATTTGGAATATTTTGTAGCAAATTTGGTTTGGAGATTTGAGTGGAAAGCTGTGGAAGGAGAAGAGGTTGATTTATCAGAGAAAATGGAATTTACCATTGTTATGAAGAAGCCTCTCAGAGCCCATATTAATGAAAGGTTTTAG | 1578 | 43.85 | MKWILFTIVSLFISFLVKLFVFPSRHGPYKLPPGPFSLPILTYNFLWLRQSPLDLESMLRTFINKYGPILTVHVGPSPAIIISDRSIAHKALIQNGAIFADRPRTLSITRITTSAKFDNITSAPYGPIWRLLRRNLAMEMFHPSRVRAYSRARKWVLDILVARLSAQPGSEGGAVVVEHFQYSMFCLLVLMCFGDKLNETQILEIQQVQRDILVNLQRFIFLNLWPKLMKVLLRNRWKEYLQIKNRQRKVLVPFIKAREKIKEERAKKEGEENEEFVVSYVDTLLDLQLIDEKRKLNNEEIVNLCSEFLNAGTDTTATSLQWIMANLVKYPKIQEKLFQEIKGVKESASTKKDGLREEEEVKEEDLGKLPYLKAVILEGLRRHPPGHFMVPHAVKEDTTLENYFIPKNGIVSFFAVGMGLDPQVWEDPMAFKPERFMSDDGGKAEYSTTFDITGNKEIKMMPFGAGRRMCPGTSLAILHLEYFVANLVWRFEWKAVEGEEVDLSEKMEFTIVMKKPLRAHINERF* | 526 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 418230 | 420031 | + | CsaV3_5G000850.1 | Csa05g00085 | 528472 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g00085 | 525 | Coils | Coil | 254 | 274 | - | - | |
Csa05g00085 | 525 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | P450 superfamily signature | 470 | 481 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | Pfam | Cytochrome P450 | 32 | 516 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 414 | 438 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 463 | 472 | IPR017972 | GO:0005506|GO:0016705 | |
Csa05g00085 | 525 | SUPERFAMILY | Cytochrome P450 | 32 | 524 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | Gene3D | Cytochrome P450 | 25 | 525 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00085 | 525 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 521 | - | - | |
Csa05g00085 | 525 | PANTHER | CYTOCHROME P450 | 5 | 521 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02815 | Csa-Chr2:24504904 | Csa05g00085 | Csa-Chr5:418230 | 0 | dispersed | |
Csa02g02817 | Csa-Chr2:24509116 | Csa05g00085 | Csa-Chr5:418230 | 0 | dispersed | |
Csa05g00085 | Csa-Chr5:418230 | Csa06g00755 | Csa-Chr6:6107273 | 5.59E-163 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g00085 | K24184 | - | csv:101218555 | 1018.45 |