Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00114 ATGTCATCTCTTTCAAGGCTTCTCTTCCTTTGTCTTTGCTTTTCTCTCCTGTTTTCCACCTCAGTTTCTGAAGATGACCAATATCGAAAGACATATATTGTATACATGGGAAGTCATCACCAAGTTTCTTCAGCTCCATTATCATCTCATCATCATATGAGAATACTACAAGAAGCAGTTGGCAGTACCTTCGCCCCACACTGTTTGCTCCATAGCTACAAGAGAAGTTTCAATGGCTTCGTTGCAAAGCTGACTGAAATTGAAGCCAAGAAAGTTTCAGAAATGGAGGGTGTAATTTCGGTATTTCCAAATGGAGAACTGCAACTTCACACAACAAGATCATGGGATTTCATGGGAATGAGTGAACAAGTTGAGCGAGTACCATCGGTGGAAAGTGATATAATTGTGGGAGTATTTGACACCGGAATTTGGCCGGAATCTCCCAGTTTCCTTGACCATGGATATGGCCCCCCGCCGCCAAAGTGGAAGGGTTCTTGTGAAGTCTCAGCTAATTTCTCTTGTAACAATAAAATCATTGGAGCTCGGTCATATCGTAGCGATGGTCGGTATCCAATAGACGATATCAAAGGTCCAAGAGATTCAAATGGCCATGGAACGCATGCAGCATCGACAGTAGCAGGTGGGTTGGTTAGACAAGCAAGTATGCTTGGTCTCGGCATGGGCACGGCAAGAGGAGGAGTCCCGTCGGCACGTATCGCAGCTTACAAAGTATGTTGGTCAGACACTTGCTCTGATGCTGACGTTCTTGCAGCATTTGATGATGCTATTGCCGATGGAGTTGACATTATCTCTATGTCCGTTGGACCAAAAAGACCGAGACCTAATTACTTTCAAGACCCCATCGCTATTGGAACTTTCCATGCAATGAGAAATGGGATCCTTACATCAACGTCCGCCGGCAATGAAGGTCCATTGCATTTCACTGTTACAAATTTCTCACCTTGGGCTTTATCGGTGGCAGCCAGTACTTCCGATAGGAGATTTCTAACTGCTGTTCAACTTGGAGATGGAAGAAAATTCAATGGGGTAACAATCAATACATTTGATTTAAATGGAACACAATATCCATTGGTGTATGCTGGAAATATACCAAATGTTACTGGTGGCTTTAATGGATCCTTCTCAAGATTTTGTTTAAGAGACTCAGTGGACAGGGAATTGGTGAAAGGTAAAATTGCCATTTGTGATAGTTTTGTGTCACCATCAGATGTGGGTTCTCTAGAAAGTGCAGTTGGAATTATAATGCAAGACAGAAGTCCAAAAGATCTAACATTCGCTTTTCCCTTACCTGCCTCTCACCTTGGCATACAGCAAAGACCTCTCATTTCCTCCTATCTCAATTCAACTAGGATTCCAACAGCAACTATATTGAAAAGCACTGGACTGAAGCTTCAAGTGGCTCCTTTGGTTGCATCTTTCTCTTCCAGAGGTCCGAATCCAACATCCCCGTACATTCTTAAGCCAGATGTGATTGGTCCAGGAGTTGAAATTCTTGCAGCATGGAGTCCTTTACGTTCACCTTCAAATGCTAAAGGCGACAATAGAAAACTTCTTTTTAATATAATCTCAGGAACTTCAATGGCTTGCCCACATGCTACAGCAGTTGCTGCCTATGTTAAATCTTTTCACCCTTCTTGGTCTCCTGCTGCCCTTAAATCAGCACTTATCACAACAGCATTTCCAATGAGAGGCGACCTTTACCCAGAGGCAGAATTCGCATATGGTTCTGGCCATATAAATCCACTAGGCGCAGTAAATCCAGGATTAATCTACAATGCTTCTGAAACTGACTACATAAGATTTCTTTGTGATGAAGGTTACAACACCACTTTTCTCCGAATAATCACAAAAGATAATTCTACATGTTCTACAACCCAGTCTATACGAGTTTATGACCTAAATTATCCTTCTTTTGCCCTTTTCACACATATCTCAACCCCATTTAGTCAAACTTCGAAAAGAAGAGTCACTAATGTTGGATCAACAAATTCTACCTATAAAGCCACCATTTCTGCTCCTTCAGGGCTTAATATTACTGTCAATCCTTCCATTCTTTCATTCAAAGCCTTGGAAGAAGAGCTAAATTTTGAGGTCACATTTGAAGGAAAAATCGATAGAAGCATTGAATCGGCTTCCTTGGTTTGGGATGATGGTGTTCATAAGGTTAGGAGTCCTATAATTGTCTTTGATTCCGATACCTTCACTAGGAATTAA 2235 41.79 MSSLSRLLFLCLCFSLLFSTSVSEDDQYRKTYIVYMGSHHQVSSAPLSSHHHMRILQEAVGSTFAPHCLLHSYKRSFNGFVAKLTEIEAKKVSEMEGVISVFPNGELQLHTTRSWDFMGMSEQVERVPSVESDIIVGVFDTGIWPESPSFLDHGYGPPPPKWKGSCEVSANFSCNNKIIGARSYRSDGRYPIDDIKGPRDSNGHGTHAASTVAGGLVRQASMLGLGMGTARGGVPSARIAAYKVCWSDTCSDADVLAAFDDAIADGVDIISMSVGPKRPRPNYFQDPIAIGTFHAMRNGILTSTSAGNEGPLHFTVTNFSPWALSVAASTSDRRFLTAVQLGDGRKFNGVTINTFDLNGTQYPLVYAGNIPNVTGGFNGSFSRFCLRDSVDRELVKGKIAICDSFVSPSDVGSLESAVGIIMQDRSPKDLTFAFPLPASHLGIQQRPLISSYLNSTRIPTATILKSTGLKLQVAPLVASFSSRGPNPTSPYILKPDVIGPGVEILAAWSPLRSPSNAKGDNRKLLFNIISGTSMACPHATAVAAYVKSFHPSWSPAALKSALITTAFPMRGDLYPEAEFAYGSGHINPLGAVNPGLIYNASETDYIRFLCDEGYNTTFLRIITKDNSTCSTTQSIRVYDLNYPSFALFTHISTPFSQTSKRRVTNVGSTNSTYKATISAPSGLNITVNPSILSFKALEEELNFEVTFEGKIDRSIESASLVWDDGVHKVRSPIIVFDSDTFTRN* 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 577314 582251 + CsaV3_5G001140.1 Csa05g00114 528501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00114 744 Gene3D Peptidase S8/S53 domain 133 605 IPR036852 GO:0004252|GO:0006508
Csa05g00114 744 Gene3D - 332 470 - -
Csa05g00114 744 Gene3D - 609 737 - -
Csa05g00114 744 CDD PA_subtilisin_like 339 463 - -
Csa05g00114 744 PANTHER PUTATIVE-RELATED 20 736 - -
Csa05g00114 744 Pfam Fibronectin type-III domain 639 735 IPR041469 -
Csa05g00114 744 ProSiteProfiles Serine proteases, subtilase domain profile. 114 592 - -
Csa05g00114 744 CDD Peptidases_S8_3 107 566 IPR034197 -
Csa05g00114 744 Pfam Peptidase inhibitor I9 31 110 IPR010259 -
Csa05g00114 744 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Csa05g00114 744 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Csa05g00114 744 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Csa05g00114 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 736 IPR045051 -
Csa05g00114 744 SUPERFAMILY Subtilisin-like 115 593 IPR036852 GO:0004252|GO:0006508
Csa05g00114 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Csa05g00114 744 Pfam Subtilase family 132 582 IPR000209 GO:0006508|GO:0008236
Csa05g00114 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00114 Csa-Chr5:577314 Csa05g02711 Csa-Chr5:27889742 0 dispersed
Csa05g02710 Csa-Chr5:27886212 Csa05g00114 Csa-Chr5:577314 7.03E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00114 - - csv:101213928 1478.0