Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g00271 | ATGGATGCCACGGTGGCGGTTGCAGTAGCTGCTTTGGTGGCGACGTACTTGATTTGGTTCTTGAATATCAAACGGTCCTTGAATGGACCACGCGTTTGGCCACTACTAGGCAGTCTTCCAGGTTTGATTAAGAATAGTCATCGTATGCATGATTGGATTGTTGAGAATTTGCAGTCCACGGGTGGCACGTACCAGACTTGCATATGCGCTATTCCGTTTTTGACTAAGAAGCAAGGTCTGGTGACAGTCACGTGTGACCCGAAGAATTTGGAGCATATTTTGAAGACACGATTCGAGAATTATCCAAAAGGGCCTAATTGGCAGGCCGTGTTTCATGATTTGCTTGGTGATGGAATCTTCAATTCAGATGGTGATACGTGGTTGTTCCAACGAAAGACTGCTGCATTGGAATTTACTACTAGAACTCTTCGTCAAGCCATGGTTCGTTGGGTTAGTCGAGCTATTAAGTCTCGATTTTGCCCAATCCTTGAGTTGGCTCAACGTCGAGAGAATAGCTTCGCTATGGCATTTGATCAAGCCACAGAAGCCACATTGTGTCGCTTTATTTTACCTGCCTTTGTATGGAGGCTAAAGAAATGGCTTCGACTCGGGATGGAAGTCACCTTAACCCAAAGTCTAAACCACACAAATCAATATTTAACCAATATCATCAACACACGTAAGCACGAATTATCCAATCAGCACCAGGTCAACAGTAATCAAACCCCTCACGACGACTTGCTATCAAGATTCATGAAAAAGAAGGAATCCTACTCGGACACATTTCTCCAACACGTGGCACTCAATTTCATCCTAGCTGGACGGGACACCTCATCCGTCGCCCTGAGCTGGTTCTTCTGGTTAGTCATCCAAACCCCACGTGTGGAGGAAAAAATCCTCGCTGAAATCTGCACCGTCCTGATGGAGACACGTGGCAAAGAAATGTCCACATGGACGGAAGAGCCATTAGGATTTGAAGAAGTGGATCGATTGATTTACCTCAAAGCCGCCTTATCGGAAACTCTCCGACTCTACCCATCGGTGCCGGAAGATTCAAAACATGTGATAAACGACGATGTTTTACCCACCGGAACTTTCGTCCCTGCCGGCTCCTCCGTCACGTATTCAATATATTCAACTGGTCGAATGAAATTCATCTGGGGAGAAGATTGTTTAGAATTCAAACCAGAGAGATGGTTACATACAAATGAAAATGCTTATAAATTCGTTGCCTTTAATGCCGGCCCAAGAATTTGTTTAGGAAAAGATTTGGCTTATTTACAAATGAAGTCGATTGCGGCAGCGGTCTTGCTCCGCCACCGCCTGACGGTGGTCCCCGGCCACCGTGTTGAGCAAAAGATGTCGTTGACGTTGTTCATGAAGTATGGCCTTAAAGTTCACTTGCATCCCAGAGATTTAGGCCGTGTGGTGGAGACAATTAGCAAAACCGCGGCGGAGACGGCGACTTGA | 1470 | 46.05 | MDATVAVAVAALVATYLIWFLNIKRSLNGPRVWPLLGSLPGLIKNSHRMHDWIVENLQSTGGTYQTCICAIPFLTKKQGLVTVTCDPKNLEHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMVRWVSRAIKSRFCPILELAQRRENSFAMAFDQATEATLCRFILPAFVWRLKKWLRLGMEVTLTQSLNHTNQYLTNIINTRKHELSNQHQVNSNQTPHDDLLSRFMKKKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVIQTPRVEEKILAEICTVLMETRGKEMSTWTEEPLGFEEVDRLIYLKAALSETLRLYPSVPEDSKHVINDDVLPTGTFVPAGSSVTYSIYSTGRMKFIWGEDCLEFKPERWLHTNENAYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVVPGHRVEQKMSLTLFMKYGLKVHLHPRDLGRVVETISKTAAETAT* | 490 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1665164 | 1666738 | + | CsaV3_5G002710.1 | Csa05g00271 | 528658 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g00271 | 489 | PANTHER | CYTOCHROME P450 | 170 | 473 | - | - | |
Csa05g00271 | 489 | Pfam | Cytochrome P450 | 186 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | P450 superfamily signature | 273 | 290 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | P450 superfamily signature | 419 | 430 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | P450 superfamily signature | 336 | 347 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | P450 superfamily signature | 410 | 419 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 412 | 421 | IPR017972 | GO:0005506|GO:0016705 | |
Csa05g00271 | 489 | PANTHER | CYTOCHROME P450 86A7 | 170 | 473 | - | - | |
Csa05g00271 | 489 | PANTHER | CYTOCHROME P450 86A7 | 5 | 171 | - | - | |
Csa05g00271 | 489 | PANTHER | CYTOCHROME P450 | 5 | 171 | - | - | |
Csa05g00271 | 489 | PRINTS | E-class P450 group I signature | 419 | 442 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | E-class P450 group I signature | 335 | 353 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | E-class P450 group I signature | 409 | 419 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | E-class P450 group I signature | 262 | 279 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | PRINTS | E-class P450 group I signature | 282 | 308 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | Gene3D | Cytochrome P450 | 22 | 473 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00271 | 489 | SUPERFAMILY | Cytochrome P450 | 20 | 471 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g02499 | Csa-Chr1:22072491 | Csa05g00271 | Csa-Chr5:1665164 | 0 | dispersed | |
Csa05g00271 | Csa-Chr5:1665164 | Csa07g01975 | Csa-Chr7:19392733 | 6.03E-135 | dispersed | |
Csa05g00271 | Csa-Chr5:1665164 | Csa06g00061 | Csa-Chr6:403217 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g00271 | K15398 | - | csv:101216733 | 969.148 |