Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00316 ATGGGGAGCTTACAACGGACGATTCTCGTCACTGGTGGGGCTGGATTCATCGGCACTCACACTGTTGTTCAGCTTCTTAAAGAAGGGTTTAGGGTGTCCATTCTCGACAATCTTGATAATTCGGTTCTTGAAGCTGTCGATCGGGTTAGGGAATTGGTCGGCCCGAAGCTTTCGCAGAATCTTGAGTTTAATTTGGGAGACTTGAGAAAGAAGGAGGATATAGAGAATTTGTTTTCCAAGACGAGATTTGATGCTGTTATTCATTTTGCTGGTCTTAAAGCTGTTGGGGAGAGTGTTGCTTTCCCACGTAGATATTTCGATAATAATCTTGTTGGAACCATCAATCTCTATGAGGTTATGGCGAAATATAATTGCAAGAAGATGGTTTTCTCGTCATCGGCAACTGTTTATGGTCAGCCTGAGAAAATTCCGTGTGTTGAGGATTTTGAATTAGTAGCATTGAATCCTTACGGTCGGACGAAGCTTTTCTTGGAAGAGATTGCTCGAGACATTCAAAAAGCAGAGCCCGGTTGGGGAATCATCTTGTTGAGATACTTCAACCCTGTTGGGGCTCATGAGAGTGGTACAATTGGTGAAGATCCAAAGGGTATTCCTAACAACCTAATGCCTTACATTCAGCAAGTCGCAGTTGGTAGACTACCGGAGCTCAATGTATATGGTCATGACTATCCAACAAAAGACGGCAGTGCTGTCCGAGACTATATCCATGTTATGGACTTAGCCGATGGCCACATTGCTGCTCTTCGAAAACTTTTTATAAATGAAGACATAGGGTGCACTGCCTACAATTTGGGGACTGGACAGGGCACATCCGTGTTAGAAATGGTTGCAGCATTTGAGAAGGCCTCGGGCAAGAAAATCCCTATAAAACTATGCCCAAGGAGGCCTGGTGATGCAACGGCGGTGTATGCATCGACAGAGAAAGCCAAGAGAGAACTCGGCTGGATGGCAAAATATGGCGTAGAGGAAATGTGTAGGGACCAATGGAAGTGGGCAAGCAGCAATCCATGGGTGGCGGAGCTCATTCTCAGGCACCGCCCCCTTCTTTATTCTTCCCATTCCGATTCTATATTTTCTTCTAGATTGAGACGAGAGCTGTTCAAAATCGGAGATCCTTGTGCTTCAGATCTGGGAGAAGAGGCGATGGCTCCGTCGCCGGCCGAACCGATCGGCGATTCGGGAACGGGAGATTCTCAGAGATCTATACCCACACCGTTTCTAACGAAAACTTATCAACTGGTTGATGATCCGGCGGTGGATGATCTTATCTCCTGGAATGAAGATGGATCTACTTTCATAGTTTGGCGACCGGCTGAATTTGCTCGAGATTTACTTCCTAAATACTTTAAGCACAATAATTTCTCTAGTTTCGTCCGTCAACTCAACACTTACGGATTCCGAAAGGTTGTGCCGGACCGATGGGAGTTTGCGAATGATTGTTTCCGGAAAGGTGAGAAAGGACTTCTCCGAGACATTCAGCGGCGGAAAGTAGTGTTGTCGGTAACGACGACGACAACGACGTCGGCTGCGGTGGCTGTGCCCGTGACGGTAGCAACGTCTCCAGCTGTGTTAGCTCACGTGATATCGCCGGCGAACTCTGCGGAAGAGCAGGTTACGTCCTCGAATTCATCGCCGATGGCATTCCAACGAAGTACGAGCTGCACCACGACGCCAGAACTTGTAAGAGAGAACGAACGGTTAAGGAAAGAGAATATGCAACTGAGTCACGAGTTGACTCAGTTGAAAGGACTCTGTAACAACATACTATCGTTAATGACGAATTACGCTTCAGGTCAGCACCAGCAGTTGGAGTCGGGGAGCGTCCGGGACGGAAAGGCGTTGGAGCTCTTACCGGCAAGACAGGTGATGGAAGACGAAGGAGCCGTCAGCGACGGGGCTCATGAGGTGAGACTAAAAATGGAGGAGAAGATGACAGCGGCGGCAGCGGCGGTAGGAATGACGCCGAAACTGTTCGGAGTGTCGATCGGAATGAAACGGATGAGGAGAGAGATAGAAGAGGAAGAAGAAGAGATGGTGGGGCAAAATCATGTACAGTCGGAAGAAGGTGAGACTGGGTCAGAGATCAAAGCGGAACCGTTGGATGAAAACTCTGAACATCCAGATGGATCCGCGTCGCCGTGGCTTGAACTCGGGAACCAAGGCTCCTGA 2190 48.36 MGSLQRTILVTGGAGFIGTHTVVQLLKEGFRVSILDNLDNSVLEAVDRVRELVGPKLSQNLEFNLGDLRKKEDIENLFSKTRFDAVIHFAGLKAVGESVAFPRRYFDNNLVGTINLYEVMAKYNCKKMVFSSSATVYGQPEKIPCVEDFELVALNPYGRTKLFLEEIARDIQKAEPGWGIILLRYFNPVGAHESGTIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGSAVRDYIHVMDLADGHIAALRKLFINEDIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRPGDATAVYASTEKAKRELGWMAKYGVEEMCRDQWKWASSNPWVAELILRHRPLLYSSHSDSIFSSRLRRELFKIGDPCASDLGEEAMAPSPAEPIGDSGTGDSQRSIPTPFLTKTYQLVDDPAVDDLISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRKGEKGLLRDIQRRKVVLSVTTTTTTSAAVAVPVTVATSPAVLAHVISPANSAEEQVTSSNSSPMAFQRSTSCTTTPELVRENERLRKENMQLSHELTQLKGLCNNILSLMTNYASGQHQQLESGSVRDGKALELLPARQVMEDEGAVSDGAHEVRLKMEEKMTAAAAAVGMTPKLFGVSIGMKRMRREIEEEEEEMVGQNHVQSEEGETGSEIKAEPLDENSEHPDGSASPWLELGNQGS* 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1968211 1972957 + CsaV3_5G003160.1 Csa05g00316 528703

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00316 729 MobiDBLite consensus disorder prediction 385 408 - -
Csa05g00316 729 MobiDBLite consensus disorder prediction 679 712 - -
Csa05g00316 729 Gene3D - 405 503 IPR036388 -
Csa05g00316 729 TIGRFAM galE: UDP-glucose 4-epimerase GalE 8 342 IPR005886 GO:0003978|GO:0006012
Csa05g00316 729 Pfam HSF-type DNA-binding 413 502 IPR000232 GO:0003700|GO:0006355|GO:0043565
Csa05g00316 729 SMART hsfneu3 409 502 IPR000232 GO:0003700|GO:0006355|GO:0043565
Csa05g00316 729 SUPERFAMILY Winged helix DNA-binding domain 410 502 IPR036390 -
Csa05g00316 729 MobiDBLite consensus disorder prediction 679 729 - -
Csa05g00316 729 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Csa05g00316 729 PANTHER BIFUNCTIONAL UDP-GLUCOSE 4-EPIMERASE AND UDP-XYLOSE 4-EPIMERASE 1 3 344 - -
Csa05g00316 729 ProSitePatterns HSF-type DNA-binding domain signature. 452 476 IPR000232 GO:0003700|GO:0006355|GO:0043565
Csa05g00316 729 Coils Coil 671 691 - -
Csa05g00316 729 PANTHER UDP-GLUCOSE 4-EPIMERASE 3 344 - -
Csa05g00316 729 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 344 IPR036291 -
Csa05g00316 729 Gene3D - 197 339 - -
Csa05g00316 729 Gene3D - 8 279 - -
Csa05g00316 729 Coils Coil 571 591 - -
Csa05g00316 729 PRINTS Heat shock factor (HSF) domain signature 464 476 IPR000232 GO:0003700|GO:0006355|GO:0043565
Csa05g00316 729 PRINTS Heat shock factor (HSF) domain signature 451 463 IPR000232 GO:0003700|GO:0006355|GO:0043565
Csa05g00316 729 PRINTS Heat shock factor (HSF) domain signature 413 436 IPR000232 GO:0003700|GO:0006355|GO:0043565
Csa05g00316 729 MobiDBLite consensus disorder prediction 544 563 - -
Csa05g00316 729 CDD UDP_G4E_1_SDR_e 7 338 IPR005886 GO:0003978|GO:0006012
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00316 K01784 galE, GALE; UDP-glucose 4-epimerase [EC:5.1.3.2] - csv:101203400 699.508
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Csa03g01695 Csa05g00316 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01940 Csa-Chr2:18190063 Csa05g00316 Csa-Chr5:1968211 2.62E-55 dispersed
Csa04g02421 Csa-Chr4:24404244 Csa05g00316 Csa-Chr5:1968211 1.81E-57 dispersed
Csa01g02666 Csa-Chr1:23693714 Csa05g00316 Csa-Chr5:1968211 6.69E-74 transposed
Csa04g00666 Csa-Chr4:4479124 Csa05g00316 Csa-Chr5:1968211 9.30E-167 transposed
Csa04g01086 Csa-Chr4:8947070 Csa05g00316 Csa-Chr5:1968211 5.19E-48 transposed
Csa04g02540 Csa-Chr4:25096080 Csa05g00316 Csa-Chr5:1968211 5.94E-06 transposed
Csa05g00184 Csa-Chr5:1072871 Csa05g00316 Csa-Chr5:1968211 3.13E-169 transposed
Csa06g02938 Csa-Chr6:25449530 Csa05g00316 Csa-Chr5:1968211 3.30E-62 transposed
Csa06g03880 Csa-Chr6:30681986 Csa05g00316 Csa-Chr5:1968211 5.17E-53 transposed
Csa03g01695 Csa-Chr3:12743761 Csa05g00316 Csa-Chr5:1968211 3.77E-71 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g620 . Blo15g00160 . . . Bpe07g00947 . . Cmo16g00141 Cmo18g01259 . Cma15g01203 . Car15g01090 Sed01g3914 . Cpe14g00115 Bhi01g01343 Tan01g0269 Cmetu06g2712 Lac11g2126 Hepe07g0173 Mch10g0169 . Cla01g00293 Cam01g0304 Cec01g0295 Cco01g0311 Clacu01g0304 Cmu01g0289 . . . . . . Csa05g00316 Chy09g01192 Cme06g00981 . . Bda06g00674 . . . . Bma12g01125 . . Cmo15g01268 Cma16g00136 Cma18g01236 Car16g00120 Car18g01140 Cpe09g00100 Cpe13g00172 Bhi12g00210 . . Lac11g2126 Hepe06g1576 . Lcy12g1687 . . . . . . . . Csa03g01695 Chy06g00930 Cme09g01727
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa03g01291 . 7 237 HSF AT4G17750 53.7 8.3e-62 235.0
Csa07g01697 . 41 281 HSF AT4G17750 51.0 1.3e-59 227.6
Csa02g01831 . 43 243 HSF AT4G17750 53.2 3.0e-59 226.5
Csa02g01172 . 26 226 HSF AT4G17750 55.8 1.9e-58 223.8
Csa01g02297 CCT,ECH 13 191 HSF AT4G17750 50.3 1.2e-44 177.9
Csa02g01940 CCT 20 118 HSF AT4G17750 71.7 5.8e-39 159.1
Csa04g02421 CCT 20 118 HSF AT4G17750 69.7 2.2e-38 157.1
Csa05g00316 CCT 382 505 HSF AT4G17750 60.5 2.2e-38 157.1
Csa03g00150 . 21 517 HSF AT5G16820 51.2 1.7e-99 360.1
Csa03g01291 . 38 242 HSF AT5G16820 56.5 1.3e-59 227.6
Csa02g01172 . 39 226 HSF AT5G16820 57.1 4.1e-58 222.6
Csa07g01697 . 42 251 HSF AT5G16820 54.7 1.2e-57 221.1
Csa02g01831 . 44 243 HSF AT5G16820 53.1 1.9e-55 213.8
Csa03g00150 . 13 514 HSF AT1G32330 54.1 8.2e-123 437.6
Csa03g01291 . 26 227 HSF AT1G32330 53.5 1.7e-59 227.3
Csa07g01697 . 30 247 HSF AT1G32330 52.7 2.2e-59 226.9
Csa02g01172 . 27 226 HSF AT1G32330 54.1 2.4e-58 223.4
Csa02g01831 . 32 224 HSF AT1G32330 54.6 5.6e-55 212.2
Csa06g01363 . 8 148 HSF AT1G32330 55.7 1.6e-41 167.5
Csa02g01940 CCT 20 117 HSF AT1G32330 71.4 3.7e-38 156.4
Csa03g01291 . 38 241 HSF AT3G02990 56.2 6.6e-61 231.9
Csa07g01697 . 42 259 HSF AT3G02990 54.5 1.5e-60 230.7
Csa02g01172 . 39 226 HSF AT3G02990 56.3 6.9e-58 221.9
Csa02g01831 . 44 243 HSF AT3G02990 52.2 1.3e-56 217.6
Csa03g01291 . 15 270 HSF AT2G26150 52.5 4.9e-69 258.5
Csa07g01697 . 30 246 HSF AT2G26150 56.4 7.8e-67 251.1
Csa03g00150 . 29 243 HSF AT2G26150 58.8 6.4e-61 231.5
Csa02g01172 . 29 232 HSF AT2G26150 51.2 4.2e-60 228.8
Csa02g00041 . 48 248 HSF AT2G26150 51.7 7.8e-51 198.0
Csa06g01363 . 5 118 HSF AT2G26150 60.5 3.8e-37 152.5
Csa03g03376 . 116 357 HSF AT5G03720 56.9 1.1e-70 264.2
Csa03g01069 . 3 460 HSF AT4G13980 51.8 3.6e-115 412.1
Csa06g01363 . 4 183 HSF AT4G13980 51.7 8.7e-45 178.3
Csa07g01697 . 1 368 HSF AT3G22830 50.1 3.0e-94 342.4
Csa03g01291 . 21 347 HSF AT3G22830 52.2 1.4e-91 333.6
Csa02g01831 . 32 241 HSF AT3G22830 55.2 9.5e-64 241.1
Csa03g00150 . 29 242 HSF AT3G22830 59.3 3.6e-63 239.2
Csa02g00041 . 48 260 HSF AT3G22830 50.2 6.4e-52 201.8
Csa07g01697 . 29 343 HSF AT3G51910 50.9 1.4e-71 266.5
Csa02g01172 . 26 323 HSF AT3G51910 53.0 4.6e-70 261.5
Csa03g01291 . 26 238 HSF AT3G51910 58.4 3.5e-62 235.3
Csa02g01831 . 32 224 HSF AT3G51910 56.5 5.4e-55 211.5
Csa02g01831 . 32 231 HSF AT3G63350 52.7 2.9e-51 199.1
Csa06g01363 . 5 152 HSF AT3G63350 54.8 5.6e-39 158.3
Csa05g01128 . 12 283 HSF AT1G67970 51.1 1.0e-67 254.2
Csa07g01697 . 43 233 HSF AT1G67970 51.0 4.8e-46 182.2
Csa03g01695 CCT 17 190 HSF AT4G36990 50.9 2.3e-40 162.9
Csa05g00316 CCT 404 725 HSF AT4G11660 52.6 9.7e-79 290.8
Csa04g02421 CCT 16 119 HSF AT4G11660 74.0 1.2e-44 177.6
Csa02g01940 CCT 16 121 HSF AT4G11660 71.7 1.6e-44 177.2
Csa06g02938 . 2 100 HSF AT4G11660 73.7 9.5e-42 167.9
Csa01g03238 . 26 119 HSF AT4G11660 70.2 4.1e-37 152.5
Csa03g00150 . 31 126 HSF AT4G11660 68.8 7.0e-37 151.8
Csa03g03764 . 22 115 HSF AT4G11660 72.3 2.1e-36 150.2
Csa04g01086 . 37 215 HSF AT2G41690 52.7 3.7e-47 185.3
Csa03g03764 . 22 221 HSF AT2G41690 50.2 4.9e-47 184.9
Csa02g01940 CCT 19 373 HSF AT1G46264 51.4 2.4e-87 319.3
Csa04g02421 CCT 19 327 HSF AT1G46264 54.6 5.2e-87 318.2
Csa01g03238 . 18 200 HSF AT1G46264 53.8 1.1e-52 204.1
Csa03g00150 . 31 138 HSF AT1G46264 72.2 2.6e-41 166.4
Csa06g01363 . 5 105 HSF AT1G46264 68.3 1.7e-37 153.7
Csa02g01172 . 32 146 HSF AT1G46264 59.1 3.8e-37 152.5
Csa07g01697 . 33 142 HSF AT1G46264 63.6 1.1e-36 151.0
Csa01g01715 CCT 10 292 HSF AT3G24520 50.9 1.6e-64 243.4
Csa03g01291 . 7 237 HSF AT4G17750 53.7 8.3e-62 235.0
Csa07g01697 . 41 281 HSF AT4G17750 51.0 1.3e-59 227.6
Csa02g01831 . 43 243 HSF AT4G17750 53.2 3.0e-59 226.5
Csa02g01172 . 26 226 HSF AT4G17750 55.8 1.9e-58 223.8
Csa01g02297 CCT,ECH 13 191 HSF AT4G17750 50.3 1.2e-44 177.9
Csa02g01940 CCT 20 118 HSF AT4G17750 71.7 5.8e-39 159.1
Csa04g02421 CCT 20 118 HSF AT4G17750 69.7 2.2e-38 157.1
Csa05g00316 CCT 382 505 HSF AT4G17750 60.5 2.2e-38 157.1
Csa03g00150 . 21 517 HSF AT5G16820 51.2 1.7e-99 360.1
Csa03g01291 . 38 242 HSF AT5G16820 56.5 1.3e-59 227.6
Csa02g01172 . 39 226 HSF AT5G16820 57.1 4.1e-58 222.6
Csa07g01697 . 42 251 HSF AT5G16820 54.7 1.2e-57 221.1
Csa02g01831 . 44 243 HSF AT5G16820 53.1 1.9e-55 213.8
Csa03g00150 . 13 514 HSF AT1G32330 54.1 8.2e-123 437.6
Csa03g01291 . 26 227 HSF AT1G32330 53.5 1.7e-59 227.3
Csa07g01697 . 30 247 HSF AT1G32330 52.7 2.2e-59 226.9
Csa02g01172 . 27 226 HSF AT1G32330 54.1 2.4e-58 223.4
Csa02g01831 . 32 224 HSF AT1G32330 54.6 5.6e-55 212.2
Csa06g01363 . 8 148 HSF AT1G32330 55.7 1.6e-41 167.5
Csa02g01940 CCT 20 117 HSF AT1G32330 71.4 3.7e-38 156.4
Csa03g01291 . 38 241 HSF AT3G02990 56.2 6.6e-61 231.9
Csa07g01697 . 42 259 HSF AT3G02990 54.5 1.5e-60 230.7
Csa02g01172 . 39 226 HSF AT3G02990 56.3 6.9e-58 221.9
Csa02g01831 . 44 243 HSF AT3G02990 52.2 1.3e-56 217.6
Csa03g01291 . 15 270 HSF AT2G26150 52.5 4.9e-69 258.5
Csa07g01697 . 30 246 HSF AT2G26150 56.4 7.8e-67 251.1
Csa03g00150 . 29 243 HSF AT2G26150 58.8 6.4e-61 231.5
Csa02g01172 . 29 232 HSF AT2G26150 51.2 4.2e-60 228.8
Csa02g00041 . 48 248 HSF AT2G26150 51.7 7.8e-51 198.0
Csa06g01363 . 5 118 HSF AT2G26150 60.5 3.8e-37 152.5
Csa03g03376 . 116 357 HSF AT5G03720 56.9 1.1e-70 264.2
Csa03g01069 . 3 460 HSF AT4G13980 51.8 3.6e-115 412.1
Csa06g01363 . 4 183 HSF AT4G13980 51.7 8.7e-45 178.3
Csa07g01697 . 1 368 HSF AT3G22830 50.1 3.0e-94 342.4
Csa03g01291 . 21 347 HSF AT3G22830 52.2 1.4e-91 333.6
Csa02g01831 . 32 241 HSF AT3G22830 55.2 9.5e-64 241.1
Csa03g00150 . 29 242 HSF AT3G22830 59.3 3.6e-63 239.2
Csa02g00041 . 48 260 HSF AT3G22830 50.2 6.4e-52 201.8
Csa07g01697 . 29 343 HSF AT3G51910 50.9 1.4e-71 266.5
Csa02g01172 . 26 323 HSF AT3G51910 53.0 4.6e-70 261.5
Csa03g01291 . 26 238 HSF AT3G51910 58.4 3.5e-62 235.3
Csa02g01831 . 32 224 HSF AT3G51910 56.5 5.4e-55 211.5
Csa02g01831 . 32 231 HSF AT3G63350 52.7 2.9e-51 199.1
Csa06g01363 . 5 152 HSF AT3G63350 54.8 5.6e-39 158.3
Csa05g01128 . 12 283 HSF AT1G67970 51.1 1.0e-67 254.2
Csa07g01697 . 43 233 HSF AT1G67970 51.0 4.8e-46 182.2
Csa03g01695 CCT 17 190 HSF AT4G36990 50.9 2.3e-40 162.9
Csa05g00316 CCT 404 725 HSF AT4G11660 52.6 9.7e-79 290.8
Csa04g02421 CCT 16 119 HSF AT4G11660 74.0 1.2e-44 177.6
Csa02g01940 CCT 16 121 HSF AT4G11660 71.7 1.6e-44 177.2
Csa06g02938 . 2 100 HSF AT4G11660 73.7 9.5e-42 167.9
Csa01g03238 . 26 119 HSF AT4G11660 70.2 4.1e-37 152.5
Csa03g00150 . 31 126 HSF AT4G11660 68.8 7.0e-37 151.8
Csa03g03764 . 22 115 HSF AT4G11660 72.3 2.1e-36 150.2
Csa04g01086 . 37 215 HSF AT2G41690 52.7 3.7e-47 185.3
Csa03g03764 . 22 221 HSF AT2G41690 50.2 4.9e-47 184.9
Csa02g01940 CCT 19 373 HSF AT1G46264 51.4 2.4e-87 319.3
Csa04g02421 CCT 19 327 HSF AT1G46264 54.6 5.2e-87 318.2
Csa01g03238 . 18 200 HSF AT1G46264 53.8 1.1e-52 204.1
Csa03g00150 . 31 138 HSF AT1G46264 72.2 2.6e-41 166.4
Csa06g01363 . 5 105 HSF AT1G46264 68.3 1.7e-37 153.7
Csa02g01172 . 32 146 HSF AT1G46264 59.1 3.8e-37 152.5
Csa07g01697 . 33 142 HSF AT1G46264 63.6 1.1e-36 151.0
Csa01g01715 CCT 10 292 HSF AT3G24520 50.9 1.6e-64 243.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004116 2 2 2 0 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 3 2 2 44
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
31676 PF16363 GDP_Man_Dehyd 2.00E-65 CL0063 Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa05g00316 Csa_Chr05 FPKM 54.112156 53.881916 57.910797 56.902218 84.981178 73.755791 80.660019 18.363579 17.98842 18.528219