Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00383 ATGGAAAATCCCACCTCCAATTTTTTCTCCTTTGACCAATCTCACTTCTTCTTCACTTTTCTCGCCGCTCTTCTAATCTTCCTCTACCTAAGACTCACCCGCCTGCGCGTCCCCCTCCCACCGGGTCCTCGCGGGGTTCCACTCCTCGGAAACCTCCCCTTTCTCCACCCCGAACTTCACACCTACTTCGCTCAACTAGGTCAAAAATACGGCCCAATAGTCAAGCTTCAGCTCGGCAGAAAAATCGGCATAATCATAAATTCACCGTCCGTGGTACGTGAAGTGTTGAAAGACCACGATGTCACGTTTGCCAATCGTGATGTTCCCCAAGCCGGGAGAGCCGCGTCGTACGGTGGTTCCGACATAGTTTGGACTCCGTATGGACCTAAGTGGCGAATGTTGAGGAAAGTTTGTGTGGTCAAGATGTTAAGCAACGCCACTTTGGATAGTGTCTACGAGCTCCGCCGTAAAGAGGTGAGAAACACGGTGGCTCACTTGTATGCGCGAGCTGGGACGGCGGTGAACGTAGGAGAGCAGGGGTTTCTGACCGTATTCAATGTGGTTACGAGCATGTTGTGGGGTGGGTCAGTGGAAGGGGAGCAAAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACGGTTTCGGAGATGACGGAGCTGTTGGGGCTGCCTAATGTTTCGGATTTTTTTCCGAGCTTGGCTCGATTTGATCTCCAAGGCATTGAGAAGAAGATGCGTGAACTTGCTCCGAGATTTGATAGCATTTTTGAGAAAATGATAGATCAACGATTGAAAATTGATGGCGGAGACGAGGGCGGGAGTGTGAAGAAGAATGATTTCTTGCAGTTCTTACTTCAGGTAAAGGATGAAGAAGAATCCAAGACTCCTCTCACCATGACCCACCTTAAAGCCTTGCTCATGGATATGGTGATTGGCGGGACGGACACATCGTCAAATACAGTTGAGTTTGCGATGGCAGAAATGTTAAAGAGCCCGAAAACTCTAAAGAAAGCACAAGAAGAAGTCGTAGCCGTGGTCGGAGAAGACAACATCGTGGAAGAGTCCCACATTCATAGTTTACCGTATCTCAAAGCTGTAATGAAAGAAACATTACGTTTACACCCGATTCTACCTCTGCTCGTGCCGCACTGCCCAAGCGAGACCGCCATCGTCTCCAATTACACAATCCCAAAGGGCTCTCGAGTGTTCATCAACGTATGGGCAATTCAGCGAGACCCCAAAAACTGGGATAATCCATTGGAGTTCGACCCAGAGAGATTCTTGAATGGTAAGTTTGATTTCAGTGGGAACGATTTTCGTTACTTCCCGTTCGGATCTGGGAGAAGAAACTGTGCAGGGATAGCAATGGCGGAAAGAATGGTAATGTATATGCTTGCTACACTTTTGCATTCATTTGATTGGAAATTGGAAGAAGGTGATGGGAAGATTGAAGTTGAAGAGAAATTTGGGATTGTTTTGAAAATGAAGACTCCTCTTGTTCTCATTCCAACGCCAAAGCTAGCTGATCCCACTCTGTATCAATAA 1542 47.73 MENPTSNFFSFDQSHFFFTFLAALLIFLYLRLTRLRVPLPPGPRGVPLLGNLPFLHPELHTYFAQLGQKYGPIVKLQLGRKIGIIINSPSVVREVLKDHDVTFANRDVPQAGRAASYGGSDIVWTPYGPKWRMLRKVCVVKMLSNATLDSVYELRRKEVRNTVAHLYARAGTAVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETVSEMTELLGLPNVSDFFPSLARFDLQGIEKKMRELAPRFDSIFEKMIDQRLKIDGGDEGGSVKKNDFLQFLLQVKDEEESKTPLTMTHLKALLMDMVIGGTDTSSNTVEFAMAEMLKSPKTLKKAQEEVVAVVGEDNIVEESHIHSLPYLKAVMKETLRLHPILPLLVPHCPSETAIVSNYTIPKGSRVFINVWAIQRDPKNWDNPLEFDPERFLNGKFDFSGNDFRYFPFGSGRRNCAGIAMAERMVMYMLATLLHSFDWKLEEGDGKIEVEEKFGIVLKMKTPLVLIPTPKLADPTLYQ* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2469249 2471719 - CsaV3_5G003830.1 Csa05g00383 528770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00383 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Csa05g00383 513 Pfam Cytochrome P450 40 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 SUPERFAMILY Cytochrome P450 40 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 Gene3D Cytochrome P450 31 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PANTHER OS08G0547900 PROTEIN 12 513 - -
Csa05g00383 513 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 12 513 - -
Csa05g00383 513 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00383 513 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00351 Csa-Chr5:2242558 Csa05g00383 Csa-Chr5:2469249 7.98E-108 dispersed
Csa05g00352 Csa-Chr5:2246079 Csa05g00383 Csa-Chr5:2469249 4.29E-99 dispersed
Csa05g00381 Csa-Chr5:2460063 Csa05g00383 Csa-Chr5:2469249 2.58E-153 dispersed
Csa05g00383 Csa-Chr5:2469249 Csa05g00385 Csa-Chr5:2478995 0 dispersed
Csa05g00382 Csa-Chr5:2463573 Csa05g00383 Csa-Chr5:2469249 9.25E-161 tandem
Csa05g00383 Csa-Chr5:2469249 Csa05g00384 Csa-Chr5:2473839 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00383 - - csv:101213303 965.681