Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00384 ATGGAATTTCTTCAAACTCTCAATTCCTATAATCCCAATAACCAAACCGGCTTTCTTCTTGCCCTCTTCGCCGGGTTTCTACTCATTTTTCTTTATGTCAAACTTTCGCAGCCCCGCTTGCAGTTGCCACCAGGTCCTCGCGGTGTTCCGCTGCTTGGAAACCTGCCTTTTCTAGACCCAAATCTTCACACTTACTTCATGGAGTTAGGCCAAAAATACGGCTCAATTGTAAAGCTCCAACTCGGTGGAAAGGTTGGTATAATCGTGAATTCACCATCAGTGGCACGTGAAATATTAAAGGACCATGATATCACGTTTGCTAATCGTGATGTTCCTCAAGCGGGCCGAGTTGCCACATATGGCGGTTTTGACATAACTTGGACCCCATACGGACCTGAGTGGCGTATGTTGAGAAAAGTTTGTACAATTAAGTTGCTTGGCAATGCTAGTTTGGACATGGTTTATGAGCTCCGTCGTAGTGAGGTTAGGAAAACAGTGGCTCAGTTGTATCAGAGAGCTGAGTCGACGGTAAAGATAGGAGAGCAGGTTTTTTTTACAGTTTTCAACGTGATTACGAGTATGTTGTGGGGTGGGACAATGGAAGGGGAGGAAAAGGCTGCCGTTGCAGTTGTGTTTCGAGAGATGGTTTCAGCCATGACTGAGTTAGCGGGTAAACCTAATATTTCTGATTTTTTTCCAAGCTTGGCTTGTTTGGATGTTCAAGGAATTGAGAAGAAAATGCTTAAGCTTCTCCCTAAATTGGACACTATTTTTGAAAAGTTGATTGATGAACGATTGAGAATGACGAATAATGAAGAAGGGAGTAGAAATAAAAATGATTTCTTGCAGTTTTTATTAAAAGTCAAAGATGAAAGCGATTCTCAAACACCTCTCACAGTGGTTCAACTCAAAGCCTTGCTAATGGATATGGTGTTTGGTGGAACAGACACATCCTCAAACACCATTGAATTCGCAATGGCGGAGATGATGAAGAACCCAAAAGTTGCAGAGAAAGCAAAGGAAGAACTCCGTGCCGTGGTTGGAGAACAGAGTATTGTTGAAGAATCCCATATACAGAGTTTGCCATATCTCAAAGCCATAATGAAAGAAACATTGCGTCTTCATCCAATTCTGCCGCTGCTAGTGCCGCATTGCCCCAGCGACACCACCGTCGTCTCCAATTACACAATTCCAAAGGGTTCTCGAGTGTTCGTCAACGTCTGGGCCATTCAACGAGACCCCAATGAATGGGAGAATCCATTGGAGTTCGACCCAGAGAGGTTTATGAACGGTAAATTGGATTTCAGTGGGAGTGATTTTCGTTATTTCCCATTTGGATCTGGTAGAAGAAAATGTCCTGGGATTGCCATGGGGGAAAGAATGGTAATGTATTTGCTTGCTACGCTTTTGCATTCGTTCGATTGGAAATTGGAAGAAGGTGAAGAGATTGAAATTGAGGAGAAATTTGGGATTGTTTTAACGATGAAGAAGCCTCTTGTTCTCATCCCCACGCCTAGATTATCAGACCCTACTCTGTATCAGTGA 1545 43.24 MEFLQTLNSYNPNNQTGFLLALFAGFLLIFLYVKLSQPRLQLPPGPRGVPLLGNLPFLDPNLHTYFMELGQKYGSIVKLQLGGKVGIIVNSPSVAREILKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKLLGNASLDMVYELRRSEVRKTVAQLYQRAESTVKIGEQVFFTVFNVITSMLWGGTMEGEEKAAVAVVFREMVSAMTELAGKPNISDFFPSLACLDVQGIEKKMLKLLPKLDTIFEKLIDERLRMTNNEEGSRNKNDFLQFLLKVKDESDSQTPLTVVQLKALLMDMVFGGTDTSSNTIEFAMAEMMKNPKVAEKAKEELRAVVGEQSIVEESHIQSLPYLKAIMKETLRLHPILPLLVPHCPSDTTVVSNYTIPKGSRVFVNVWAIQRDPNEWENPLEFDPERFMNGKLDFSGSDFRYFPFGSGRRKCPGIAMGERMVMYLLATLLHSFDWKLEEGEEIEIEEKFGIVLTMKKPLVLIPTPRLSDPTLYQ* 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2473839 2476868 - CsaV3_5G003840.1 Csa05g00384 528771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00384 514 Pfam Cytochrome P450 43 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 SUPERFAMILY Cytochrome P450 43 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PANTHER OS08G0547900 PROTEIN 4 514 - -
Csa05g00384 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00384 514 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 4 514 - -
Csa05g00384 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Csa05g00384 514 Gene3D Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g00382 Csa-Chr5:2463573 Csa05g00384 Csa-Chr5:2473839 1.68E-138 dispersed
Csa05g00384 Csa-Chr5:2473839 Csa03g02820 Csa-Chr3:27003519 1.94E-115 dispersed
Csa05g00383 Csa-Chr5:2469249 Csa05g00384 Csa-Chr5:2473839 0 tandem
Csa05g00384 Csa-Chr5:2473839 Csa05g00385 Csa-Chr5:2478995 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00384 - - csv:101213545 989.949