Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa05g00384 | ATGGAATTTCTTCAAACTCTCAATTCCTATAATCCCAATAACCAAACCGGCTTTCTTCTTGCCCTCTTCGCCGGGTTTCTACTCATTTTTCTTTATGTCAAACTTTCGCAGCCCCGCTTGCAGTTGCCACCAGGTCCTCGCGGTGTTCCGCTGCTTGGAAACCTGCCTTTTCTAGACCCAAATCTTCACACTTACTTCATGGAGTTAGGCCAAAAATACGGCTCAATTGTAAAGCTCCAACTCGGTGGAAAGGTTGGTATAATCGTGAATTCACCATCAGTGGCACGTGAAATATTAAAGGACCATGATATCACGTTTGCTAATCGTGATGTTCCTCAAGCGGGCCGAGTTGCCACATATGGCGGTTTTGACATAACTTGGACCCCATACGGACCTGAGTGGCGTATGTTGAGAAAAGTTTGTACAATTAAGTTGCTTGGCAATGCTAGTTTGGACATGGTTTATGAGCTCCGTCGTAGTGAGGTTAGGAAAACAGTGGCTCAGTTGTATCAGAGAGCTGAGTCGACGGTAAAGATAGGAGAGCAGGTTTTTTTTACAGTTTTCAACGTGATTACGAGTATGTTGTGGGGTGGGACAATGGAAGGGGAGGAAAAGGCTGCCGTTGCAGTTGTGTTTCGAGAGATGGTTTCAGCCATGACTGAGTTAGCGGGTAAACCTAATATTTCTGATTTTTTTCCAAGCTTGGCTTGTTTGGATGTTCAAGGAATTGAGAAGAAAATGCTTAAGCTTCTCCCTAAATTGGACACTATTTTTGAAAAGTTGATTGATGAACGATTGAGAATGACGAATAATGAAGAAGGGAGTAGAAATAAAAATGATTTCTTGCAGTTTTTATTAAAAGTCAAAGATGAAAGCGATTCTCAAACACCTCTCACAGTGGTTCAACTCAAAGCCTTGCTAATGGATATGGTGTTTGGTGGAACAGACACATCCTCAAACACCATTGAATTCGCAATGGCGGAGATGATGAAGAACCCAAAAGTTGCAGAGAAAGCAAAGGAAGAACTCCGTGCCGTGGTTGGAGAACAGAGTATTGTTGAAGAATCCCATATACAGAGTTTGCCATATCTCAAAGCCATAATGAAAGAAACATTGCGTCTTCATCCAATTCTGCCGCTGCTAGTGCCGCATTGCCCCAGCGACACCACCGTCGTCTCCAATTACACAATTCCAAAGGGTTCTCGAGTGTTCGTCAACGTCTGGGCCATTCAACGAGACCCCAATGAATGGGAGAATCCATTGGAGTTCGACCCAGAGAGGTTTATGAACGGTAAATTGGATTTCAGTGGGAGTGATTTTCGTTATTTCCCATTTGGATCTGGTAGAAGAAAATGTCCTGGGATTGCCATGGGGGAAAGAATGGTAATGTATTTGCTTGCTACGCTTTTGCATTCGTTCGATTGGAAATTGGAAGAAGGTGAAGAGATTGAAATTGAGGAGAAATTTGGGATTGTTTTAACGATGAAGAAGCCTCTTGTTCTCATCCCCACGCCTAGATTATCAGACCCTACTCTGTATCAGTGA | 1545 | 43.24 | MEFLQTLNSYNPNNQTGFLLALFAGFLLIFLYVKLSQPRLQLPPGPRGVPLLGNLPFLDPNLHTYFMELGQKYGSIVKLQLGGKVGIIVNSPSVAREILKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKLLGNASLDMVYELRRSEVRKTVAQLYQRAESTVKIGEQVFFTVFNVITSMLWGGTMEGEEKAAVAVVFREMVSAMTELAGKPNISDFFPSLACLDVQGIEKKMLKLLPKLDTIFEKLIDERLRMTNNEEGSRNKNDFLQFLLKVKDESDSQTPLTVVQLKALLMDMVFGGTDTSSNTIEFAMAEMMKNPKVAEKAKEELRAVVGEQSIVEESHIQSLPYLKAIMKETLRLHPILPLLVPHCPSDTTVVSNYTIPKGSRVFVNVWAIQRDPNEWENPLEFDPERFMNGKLDFSGSDFRYFPFGSGRRKCPGIAMGERMVMYLLATLLHSFDWKLEEGEEIEIEEKFGIVLTMKKPLVLIPTPRLSDPTLYQ* | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2473839 | 2476868 | - | CsaV3_5G003840.1 | Csa05g00384 | 528771 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa05g00384 | 514 | Pfam | Cytochrome P450 | 43 | 498 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | SUPERFAMILY | Cytochrome P450 | 43 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PANTHER | OS08G0547900 PROTEIN | 4 | 514 | - | - | |
Csa05g00384 | 514 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 94 | 115 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa05g00384 | 514 | PANTHER | CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED | 4 | 514 | - | - | |
Csa05g00384 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506|GO:0016705 | |
Csa05g00384 | 514 | Gene3D | Cytochrome P450 | 32 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa05g00382 | Csa-Chr5:2463573 | Csa05g00384 | Csa-Chr5:2473839 | 1.68E-138 | dispersed | |
Csa05g00384 | Csa-Chr5:2473839 | Csa03g02820 | Csa-Chr3:27003519 | 1.94E-115 | dispersed | |
Csa05g00383 | Csa-Chr5:2469249 | Csa05g00384 | Csa-Chr5:2473839 | 0 | tandem | |
Csa05g00384 | Csa-Chr5:2473839 | Csa05g00385 | Csa-Chr5:2478995 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa05g00384 | - | - | csv:101213545 | 989.949 |