Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00465 ATGAAAAGGATGAATGCAAACAACCCTAATAGTACAGTTGAAGATTCCTCCTCTCATCATCAACTTACTCACGATATTCATTCCACTGTCTTCCCGTATTTTGCAAGGTGGCAAACTACGTACGGAAAAGTATTTACATATTGGTTGGGGACAGAGCCATTCTTGTATATAGCAGAACCAGAATTAGTGAAGATATTATCAAAAGAAGTAAAAGCAAAGCATTGGGGAAAGCCATCAGTGTTCAAAAATGACAGAAAATCAATGTTTGGAAATGGTTTGGTAATGGCTGAAGGAGATGAATGGGTTCGCCAAAGACATATCATTACTCCTGCGTTTAATCCTTCCAACTTGAAGGCAATGGCAAGCTTAATGGTGGAGTCCGCCACCCAAATGGTGGAGAGATGGGCTAACCTTATCATCTCCGGCAACCCTCAAATCGAAGTCGAGCAGGAGATAACTTCCACCGCCGGCGAAATCATTGCCAAAACCAGCTTTGGATTCCATCATGAAAGCGGCCGACAAGTCTTCAACAAACTCCGCCAACTCCAATTCACTCTATTCAAAACCAACCGCCTTGTCGGCGTCCCCTTCGCGGGGCTTTTAAACGCCGCCAAGGCCCGGGAGGCGAAAGTCCTCGGGGAGGAGATCGACGAATTGTTTCGGTCGGTGATTGCGGAGAGGAGAGAAAATGCGGTGGCGGAGACGACGAGGACGACGGAGCAGCAGAATGATCTTTTGAGTTTGCTTTTGAAAGAGAGTAGTAGTGGCGGTGGAGGAGGAGGAGAAGGGAGGAGGCTGAGTACGGCGGAGCTTATTGATGAATGTAAAACGTTCTTTTTCGGTGGACATGAAACGACGGCGTTGGCTTTGACGTGGACTTTGATGCTATTGGCTGTTCATTCTGAATGGCAAACAATATTGAGAGAAGAAATTAAGGAAGTTTTTGGTCATAATTTACAAACTCAATTTGATTTCACTAACCTTTCTTCACTCAAAAAGATGGGATGGGTGATGAGTGAGGTCCTACGTCTATATCCATCAGCTCCAAATGTGCAAAGACAAGCAAGAAAAGACATTACGATTGATGGACTCACAATCCCAAATGGGACCAACATGTGGATTGATGTTGTATCCATGCACCATGACCAAGCTCTTTGGGGTCACCAAGTCAATGAATTTCACCCCGAGAGGTTCCGAAACGACACTGTTTCGGGAGGTTGCACACACAAGATGGGTTATTTGCCCTTCGGCTTTGGAGGAAGAATGTGTGTTGGTAGGCACTTGACCTTTATGGAGTATAAGATTGTTTTAACTCTTATTTTGTCTAGGTTTTCCTTCTCTTTGTCCTCAGATTATCAACATTCGCCTTCTATAATGCTCTCGTTACGACCTGCCCATGGTCTGCCTCTTGTTTTTCGACTACTCGAAGAATAA 1434 44.77 MKRMNANNPNSTVEDSSSHHQLTHDIHSTVFPYFARWQTTYGKVFTYWLGTEPFLYIAEPELVKILSKEVKAKHWGKPSVFKNDRKSMFGNGLVMAEGDEWVRQRHIITPAFNPSNLKAMASLMVESATQMVERWANLIISGNPQIEVEQEITSTAGEIIAKTSFGFHHESGRQVFNKLRQLQFTLFKTNRLVGVPFAGLLNAAKAREAKVLGEEIDELFRSVIAERRENAVAETTRTTEQQNDLLSLLLKESSSGGGGGGEGRRLSTAELIDECKTFFFGGHETTALALTWTLMLLAVHSEWQTILREEIKEVFGHNLQTQFDFTNLSSLKKMGWVMSEVLRLYPSAPNVQRQARKDITIDGLTIPNGTNMWIDVVSMHHDQALWGHQVNEFHPERFRNDTVSGGCTHKMGYLPFGFGGRMCVGRHLTFMEYKIVLTLILSRFSFSLSSDYQHSPSIMLSLRPAHGLPLVFRLLEE* 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3021204 3024466 + CsaV3_5G004650.1 Csa05g00465 528852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00465 477 Pfam Cytochrome P450 27 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Csa05g00465 477 MobiDBLite consensus disorder prediction 1 20 - -
Csa05g00465 477 SUPERFAMILY Cytochrome P450 25 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 10 471 - -
Csa05g00465 477 Gene3D Cytochrome P450 16 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 471 - -
Csa05g00465 477 MobiDBLite consensus disorder prediction 1 17 - -
Csa05g00465 477 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS E-class P450 group I signature 38 57 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa05g00465 477 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01719 Csa-Chr3:12874563 Csa05g00465 Csa-Chr5:3021204 0 dispersed
Csa05g00465 Csa-Chr5:3021204 Csa05g03102 Csa-Chr5:31027128 2.66E-107 dispersed
Csa05g00465 Csa-Chr5:3021204 Csa02g00167 Csa-Chr2:1164961 8.31E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00465 - - csv:101220403 921.383