Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa05g00569 | ATGGCATCAACGCGAGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAGCAGTGGAATCTCCAAGGCAAAGGCTTCAAAGCCCTCTTCTAGGAAAACTAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCGTTTCTCACGGATCCCTCGACCTTCAAGATGATTATGGCGTGTCTGAGAATACGCTGAGGCAATTTGATATGAACACGGCATATGGACCTTGCCTCGGAATGACCAGAATGGCACGATGGGAGCGTGCCTGTAGTCTTGGTCTGAACCCTCCAAAAGACATTGGGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAA | 378 | 49.21 | MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHGSLDLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWDSRV* | 126 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3742540 | 3744396 | - | CsaV3_5G005690.1 | Csa05g00569 | 528956 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa05g00569 | 125 | MobiDBLite | consensus disorder prediction | 19 | 45 | - | - | |
| Csa05g00569 | 125 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Csa05g00569 | 125 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 4 | 5 | 125 | - | - | |
| Csa05g00569 | 125 | PANTHER | DNA POLYMERASE DELTA SUBUNIT 4 | 5 | 125 | IPR007218 | GO:0000731|GO:0006260 | |
| Csa05g00569 | 125 | Pfam | DNA polymerase delta, subunit 4 | 62 | 111 | IPR007218 | GO:0000731|GO:0006260 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa05g00569 | K03505 | - | csv:101209940 | 233.032 |