Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00645 ATGATCATGGCAACTTCGACACTGGGCAGCACCATCGGTTTCTCCTACTCATCGTCTTCCTCGGATATCTCTGCTTATTGTATTCTCTCTTCAACCACCAGATTCAGCTTCTCCAGCATCATTCCTTCTCCTCTCAAACTTCAAAAACAACCACCTGGAAGAAGAGCTAGAGCTCTAATTGCTGTGAAAATGGCTGCTCAAGCTTTTCAGGAAGTTCTTCCTCCAGCCCTCACTTCAGTTTCAGAGCCACCTCCTATCTTCGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCACAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAGGATACAATTGGTTCCCATAAATCTACAAGATAGGCCTTCATGGTACAAGGAAAAAGTTTACCCACCTAACAAGGTTCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGGCCTTCATTATTTCCTGATGAGCCAGAAAAGAGAGAGTTTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGCTACGTTTGACTACATCGAGTCTGCTCTTTCTAAATATGGAGATGGCCCATTTTTCCTAGGCCAGTTCAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCGGCCGTTCTTATTGGAAGTAAAAACGTATGACATCACTGCTGGCAGGCCAAAACTGGCAGCCTGGATTGAGGAGACGAACATGATCGAGGGGTACCGGCAAACAAGGCGCGATCCACAGGAACATGTTGATAGTTATAAGAAGCGATTCTTGAGCCGTTTGTGA 900 43.11 MIMATSTLGSTIGFSYSSSSSDISAYCILSSTTRFSFSSIIPSPLKLQKQPPGRRARALIAVKMAAQAFQEVLPPALTSVSEPPPIFDGTTRLYISYTCPYAQRVWITRNCKGLQNRIQLVPINLQDRPSWYKEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDEPEKREFAEELINYVNSFTGSVVSSFKGDGNEADATFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERFRPFLLEVKTYDITAGRPKLAAWIEETNMIEGYRQTRRDPQEHVDSYKKRFLSRL* 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4299122 4305918 - CsaV3_5G006450.1 Csa05g00645 529032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00645 299 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 89 170 IPR004045 -
Csa05g00645 299 SFLD Glutathione Transferase (cytosolic) 93 270 IPR040079 -
Csa05g00645 299 Pfam Glutathione S-transferase, N-terminal domain 93 169 IPR004045 -
Csa05g00645 299 CDD GST_C_Lambda 175 292 - -
Csa05g00645 299 Pfam Glutathione S-transferase, C-terminal domain 206 269 - -
Csa05g00645 299 Gene3D - 168 299 - -
Csa05g00645 299 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 49 296 - -
Csa05g00645 299 SUPERFAMILY Thioredoxin-like 83 171 IPR036249 -
Csa05g00645 299 PANTHER GLUTATHIONE S-TRANSFERASE L1 49 296 IPR044629 GO:0004364
Csa05g00645 299 Gene3D Glutaredoxin 64 167 - -
Csa05g00645 299 SUPERFAMILY GST C-terminal domain-like 166 295 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03229 Csa-Chr3:29669445 Csa05g00645 Csa-Chr5:4299122 2.37E-110 dispersed
Csa03g03230 Csa-Chr3:29677457 Csa05g00645 Csa-Chr5:4299122 2.45E-106 dispersed
Csa05g00645 Csa-Chr5:4299122 Csa03g01146 Csa-Chr3:8982297 4.00E-08 dispersed
Csa03g03227 Csa-Chr3:29660892 Csa05g00645 Csa-Chr5:4299122 7.49E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00645 K00799 - csv:101220995 585.874