Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa05g00668 ATGGCCCTCGAAGCTGCGGTCAAGGCTGCTGTTGGTGCACCCGATGAGATTGGGGACTGCCCTTTCAGTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAACTTCCTTACAAATTGCATCTCATCAATCTATCCGACAAACCCAGTTGGTTCTTGAAAGTGAGCCCAGAAGGAAAAGTGCCAGTGGTGAAGTTTGATGACGAATGGGTTCCTGATTCTGATGTCATTGTGGAGACTCTTGAGAAGAAGTATCCAGAGCCTTCTCTGGTTACTCCTCCTCAATTTTCTTCTGTGGGATCGAAGATATTTAGTGCTTTTACAAAATTCTTGAAAAGCAAGGACCCGAAGGATCATTCGGAGCAGAATTTACTTGAAGAGTTGAAGGCGCTTGATGAGCATCTTAAGGCTCATGGACCTTATGTTGCTGGAGAGAAGGTAACTGCTGTTGATTTGAGTCTGGCACCGAAGTTGTACCATGTTGATGTTGCTCTTGGCCATTTTAAGAAGTGGTGTATCCCCAAAGACTTGGCCTGTTTAATCTCCTACAAAGAGTTGCTTTTCGCTCGAGAATCATTCGTGAAGACGAAAGCTACCCCAGAACATGTAATTGCTGGATGGGAGCCCAAGGTGAATCCTGCATGA 642 45.48 MALEAAVKAAVGAPDEIGDCPFSQRVLLTLEEKKLPYKLHLINLSDKPSWFLKVSPEGKVPVVKFDDEWVPDSDVIVETLEKKYPEPSLVTPPQFSSVGSKIFSAFTKFLKSKDPKDHSEQNLLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHVDVALGHFKKWCIPKDLACLISYKELLFARESFVKTKATPEHVIAGWEPKVNPA* 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4484418 4489087 + CsaV3_5G006680.1 Csa05g00668 529055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa05g00668 213 SFLD Glutathione Transferase (cytosolic) 19 164 IPR040079 -
Csa05g00668 213 SUPERFAMILY GST C-terminal domain-like 84 211 IPR036282 -
Csa05g00668 213 Gene3D Glutaredoxin 1 89 - -
Csa05g00668 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 IPR044627 GO:0033355|GO:0045174|GO:0098869
Csa05g00668 213 CDD GST_N_family 20 81 - -
Csa05g00668 213 SFLD Main (cytGST) 19 164 - -
Csa05g00668 213 Gene3D - 90 212 - -
Csa05g00668 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Csa05g00668 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 - -
Csa05g00668 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Csa05g00668 213 Pfam Glutathione S-transferase, C-terminal domain 119 167 - -
Csa05g00668 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02084 Csa-Chr3:17117911 Csa05g00668 Csa-Chr5:4484418 5.15E-96 dispersed
Csa05g00668 Csa-Chr5:4484418 Csa02g01635 Csa-Chr2:15494439 5.09E-07 dispersed
Csa05g00668 Csa-Chr5:4484418 Csa03g03227 Csa-Chr3:29660892 1.01E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa05g00668 K21888 - csv:101203666 427.557